Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CASQ2O14958 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.4□□□□□ -0.1
CASQ2O14958 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.4□□□□□ -0.1
CASQ2O14958 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.4□□□□□ -0.1
CASQ2O14958 AC116407.4-201ENST00000623319 1061 ntBASIC14.4□□□□□ -0.1
CASQ2O14958 AC133561.5-201ENST00000635547 218 ntBASIC14.4□□□□□ -0.1
CASQ2O14958 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CASQ2O14958 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CASQ2O14958 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CASQ2O14958 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CASQ2O14958 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CASQ2O14958 TCAM1P-207ENST00000485295 1537 ntBASIC14.4□□□□□ -0.1
CASQ2O14958 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CASQ2O14958 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CASQ2O14958 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.39□□□□□ -0.11
CASQ2O14958 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.39□□□□□ -0.11
CASQ2O14958 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CASQ2O14958 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC14.39□□□□□ -0.11
CASQ2O14958 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CASQ2O14958 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
CASQ2O14958 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.39□□□□□ -0.11
CASQ2O14958 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CASQ2O14958 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.39□□□□□ -0.11
CASQ2O14958 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.39□□□□□ -0.11
CASQ2O14958 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.39□□□□□ -0.11
CASQ2O14958 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.39□□□□□ -0.11
CASQ2O14958 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.39□□□□□ -0.11
CASQ2O14958 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 Z82170.1-201ENST00000625081 3192 ntBASIC14.39□□□□□ -0.11
CASQ2O14958 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.39□□□□□ -0.11
CASQ2O14958 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CASQ2O14958 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC14.39□□□□□ -0.11
CASQ2O14958 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.39□□□□□ -0.11
CASQ2O14958 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.39□□□□□ -0.11
CASQ2O14958 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CASQ2O14958 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.38□□□□□ -0.11
CASQ2O14958 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CASQ2O14958 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CASQ2O14958 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CASQ2O14958 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.38□□□□□ -0.11
CASQ2O14958 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.38□□□□□ -0.11
CASQ2O14958 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.38□□□□□ -0.11
CASQ2O14958 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.38□□□□□ -0.11
CASQ2O14958 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.38□□□□□ -0.11
CASQ2O14958 AL513480.1-201ENST00000451731 511 ntBASIC14.38□□□□□ -0.11
CASQ2O14958 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.38□□□□□ -0.11
CASQ2O14958 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
CASQ2O14958 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.38□□□□□ -0.11
CASQ2O14958 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.38□□□□□ -0.11
CASQ2O14958 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.38□□□□□ -0.11
CASQ2O14958 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.38□□□□□ -0.11
CASQ2O14958 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CASQ2O14958 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 PTPRVP-205ENST00000641549 5067 ntBASIC14.38□□□□□ -0.11
CASQ2O14958 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
CASQ2O14958 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CASQ2O14958 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CASQ2O14958 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CASQ2O14958 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC14.38□□□□□ -0.11
CASQ2O14958 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.38□□□□□ -0.11
CASQ2O14958 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.38□□□□□ -0.11
CASQ2O14958 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CASQ2O14958 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CASQ2O14958 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CASQ2O14958 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CASQ2O14958 BEND3P3-201ENST00000611030 2440 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms