Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD2O14647 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD2O14647 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD2O14647 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD2O14647 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CHD2O14647 AP005117.1-202ENST00000581724 1908 ntBASIC20.28■□□□□ 0.84
CHD2O14647 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CHD2O14647 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.28■□□□□ 0.84
CHD2O14647 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD2O14647 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CHD2O14647 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHD2O14647 RNVU1-8-201ENST00000364272 125 ntBASIC20.27■□□□□ 0.84
CHD2O14647 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC20.27■□□□□ 0.84
CHD2O14647 NME6-208ENST00000435684 599 ntTSL 2 BASIC20.27■□□□□ 0.84
CHD2O14647 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD2O14647 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC20.27■□□□□ 0.84
CHD2O14647 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC20.27■□□□□ 0.84
CHD2O14647 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC20.27■□□□□ 0.84
CHD2O14647 AL591471.1-201ENST00000621855 229 ntBASIC20.27■□□□□ 0.84
CHD2O14647 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHD2O14647 API5-203ENST00000455725 2257 ntTSL 2 BASIC20.27■□□□□ 0.84
CHD2O14647 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD2O14647 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.27■□□□□ 0.84
CHD2O14647 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHD2O14647 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD2O14647 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CHD2O14647 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHD2O14647 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD2O14647 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC20.27■□□□□ 0.84
CHD2O14647 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CHD2O14647 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHD2O14647 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CHD2O14647 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC20.27■□□□□ 0.84
CHD2O14647 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC20.27■□□□□ 0.84
CHD2O14647 AL451000.1-201ENST00000451300 1186 ntBASIC20.27■□□□□ 0.84
CHD2O14647 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.27■□□□□ 0.83
CHD2O14647 AC067931.2-201ENST00000623655 2003 ntBASIC20.27■□□□□ 0.83
CHD2O14647 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.26■□□□□ 0.83
CHD2O14647 WASH3P-207ENST00000560956 1394 ntBASIC20.26■□□□□ 0.83
CHD2O14647 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CHD2O14647 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHD2O14647 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHD2O14647 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHD2O14647 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHD2O14647 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC20.26■□□□□ 0.83
CHD2O14647 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CHD2O14647 AC063952.3-201ENST00000467756 308 ntBASIC20.26■□□□□ 0.83
CHD2O14647 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC20.26■□□□□ 0.83
CHD2O14647 GDNF-207ENST00000515058 764 ntTSL 5 BASIC20.26■□□□□ 0.83
CHD2O14647 FOXN3-AS2-201ENST00000554071 1262 ntBASIC20.26■□□□□ 0.83
CHD2O14647 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC20.26■□□□□ 0.83
CHD2O14647 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC20.26■□□□□ 0.83
CHD2O14647 MBP-238ENST00000580402 915 ntTSL 5 BASIC20.26■□□□□ 0.83
CHD2O14647 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHD2O14647 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC20.26■□□□□ 0.83
CHD2O14647 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CHD2O14647 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC20.26■□□□□ 0.83
CHD2O14647 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHD2O14647 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHD2O14647 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHD2O14647 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC20.26■□□□□ 0.83
CHD2O14647 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
CHD2O14647 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHD2O14647 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHD2O14647 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD2O14647 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD2O14647 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CHD2O14647 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD2O14647 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC20.25■□□□□ 0.83
CHD2O14647 BPIFB5P-201ENST00000457066 1099 ntBASIC20.25■□□□□ 0.83
CHD2O14647 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CHD2O14647 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC20.25■□□□□ 0.83
CHD2O14647 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC20.25■□□□□ 0.83
CHD2O14647 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC20.25■□□□□ 0.83
CHD2O14647 NDUFB10P1-201ENST00000567319 521 ntBASIC20.25■□□□□ 0.83
CHD2O14647 TP53-221ENST00000615910 1149 ntTSL 5 BASIC20.25■□□□□ 0.83
CHD2O14647 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CHD2O14647 MIR6816-201ENST00000620368 66 ntBASIC20.25■□□□□ 0.83
CHD2O14647 AC019109.1-201ENST00000401725 1874 ntBASIC20.25■□□□□ 0.83
CHD2O14647 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD2O14647 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CHD2O14647 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD2O14647 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD2O14647 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CHD2O14647 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD2O14647 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CHD2O14647 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CHD2O14647 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CHD2O14647 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC20.25■□□□□ 0.83
CHD2O14647 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHD2O14647 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD2O14647 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
CHD2O14647 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHD2O14647 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD2O14647 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC20.25■□□□□ 0.83
CHD2O14647 HLA-DPA2-205ENST00000433582 733 ntBASIC20.25■□□□□ 0.83
CHD2O14647 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC20.25■□□□□ 0.83
CHD2O14647 BRI3P1-201ENST00000440440 378 ntBASIC20.25■□□□□ 0.83
CHD2O14647 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC20.25■□□□□ 0.83
CHD2O14647 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms