Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
DDX39AO00148 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.98■□□□□ 0.31
DDX39AO00148 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
DDX39AO00148 TUBB1P2-201ENST00000422712 1306 ntBASIC16.98■□□□□ 0.31
DDX39AO00148 TUBB1P1-201ENST00000503144 1300 ntBASIC16.98■□□□□ 0.31
DDX39AO00148 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.98■□□□□ 0.31
DDX39AO00148 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
DDX39AO00148 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.98■□□□□ 0.31
DDX39AO00148 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
DDX39AO00148 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.98■□□□□ 0.31
DDX39AO00148 MIR326-201ENST00000362220 95 ntBASIC16.98■□□□□ 0.31
DDX39AO00148 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 CD8B2-202ENST00000417670 633 ntBASIC16.98■□□□□ 0.31
DDX39AO00148 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.98■□□□□ 0.31
DDX39AO00148 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.98■□□□□ 0.31
DDX39AO00148 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.98■□□□□ 0.31
DDX39AO00148 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
DDX39AO00148 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.98■□□□□ 0.31
DDX39AO00148 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.98■□□□□ 0.31
DDX39AO00148 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
DDX39AO00148 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.98■□□□□ 0.31
DDX39AO00148 AC138466.3-201ENST00000619983 221 ntBASIC16.98■□□□□ 0.31
DDX39AO00148 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 AC022532.1-201ENST00000624563 1728 ntBASIC16.98■□□□□ 0.31
DDX39AO00148 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 AC006486.2-201ENST00000624246 2199 ntBASIC16.98■□□□□ 0.31
DDX39AO00148 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
DDX39AO00148 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
DDX39AO00148 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DDX39AO00148 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DDX39AO00148 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DDX39AO00148 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
DDX39AO00148 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DDX39AO00148 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DDX39AO00148 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.97■□□□□ 0.31
DDX39AO00148 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DDX39AO00148 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
DDX39AO00148 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
DDX39AO00148 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
DDX39AO00148 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
DDX39AO00148 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.97■□□□□ 0.31
DDX39AO00148 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.97■□□□□ 0.31
DDX39AO00148 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.97■□□□□ 0.31
DDX39AO00148 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
DDX39AO00148 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DDX39AO00148 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DDX39AO00148 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.97■□□□□ 0.31
DDX39AO00148 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DDX39AO00148 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
DDX39AO00148 CNN2P10-201ENST00000443067 918 ntBASIC16.97■□□□□ 0.31
DDX39AO00148 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.97■□□□□ 0.31
DDX39AO00148 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
DDX39AO00148 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.97■□□□□ 0.31
DDX39AO00148 AC106820.3-201ENST00000561653 397 ntBASIC16.97■□□□□ 0.31
DDX39AO00148 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.97■□□□□ 0.31
DDX39AO00148 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.97■□□□□ 0.31
DDX39AO00148 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.97■□□□□ 0.31
DDX39AO00148 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.97■□□□□ 0.31
DDX39AO00148 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.97■□□□□ 0.31
DDX39AO00148 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DDX39AO00148 AC046158.3-201ENST00000624947 2558 ntBASIC16.97■□□□□ 0.31
DDX39AO00148 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
DDX39AO00148 KRT8P4-201ENST00000509735 1454 ntBASIC16.97■□□□□ 0.31
DDX39AO00148 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
DDX39AO00148 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.97■□□□□ 0.31
DDX39AO00148 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.97■□□□□ 0.31
DDX39AO00148 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DDX39AO00148 INE2-201ENST00000630399 1874 ntBASIC16.97■□□□□ 0.31
DDX39AO00148 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DDX39AO00148 FKBP4P6-201ENST00000457486 1332 ntBASIC16.96■□□□□ 0.31
DDX39AO00148 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX39AO00148 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX39AO00148 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX39AO00148 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
DDX39AO00148 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.96■□□□□ 0.31
DDX39AO00148 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
DDX39AO00148 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX39AO00148 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.96■□□□□ 0.31
DDX39AO00148 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX39AO00148 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.96■□□□□ 0.31
DDX39AO00148 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.96■□□□□ 0.31
DDX39AO00148 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX39AO00148 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX39AO00148 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.96■□□□□ 0.31
DDX39AO00148 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
DDX39AO00148 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms