Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 MIR6869-201ENST00000619434 62 ntBASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 AC132938.4-201ENST00000623835 848 ntBASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 AL138709.1-201ENST00000614840 1693 ntBASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 KRT8P44-201ENST00000441609 1350 ntBASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 AC104640.1-201ENST00000562617 2109 ntBASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA2E9PIF3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 AC023024.2-201ENST00000623561 1993 ntBASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 CICP11-201ENST00000434745 2827 ntBASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 AL590640.2-201ENST00000457038 527 ntBASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 AHCYP2-201ENST00000430630 1300 ntBASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA2E9PIF3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA2E9PIF3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
NPIPA2E9PIF3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA2E9PIF3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA2E9PIF3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA2E9PIF3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA2E9PIF3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.79□□□□□ -0.2
NPIPA2E9PIF3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NPIPA2E9PIF3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA2E9PIF3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA2E9PIF3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NPIPA2E9PIF3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms