Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 YBX2P1-201ENST00000394192 760 ntBASIC12.97□□□□□ -0.33
TMEM235A6NFC5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 AL133215.2-201ENST00000609242 977 ntBASIC12.97□□□□□ -0.33
TMEM235A6NFC5 AC003101.2-201ENST00000612557 442 ntBASIC12.97□□□□□ -0.33
TMEM235A6NFC5 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM235A6NFC5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 AC022447.6-201ENST00000515522 438 ntBASIC12.96□□□□□ -0.33
TMEM235A6NFC5 ALG1L8P-201ENST00000533887 760 ntBASIC12.96□□□□□ -0.33
TMEM235A6NFC5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 FAM197Y3-203ENST00000618346 717 ntBASIC12.96□□□□□ -0.33
TMEM235A6NFC5 AC023090.2-201ENST00000625182 2110 ntBASIC12.96□□□□□ -0.33
TMEM235A6NFC5 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.96□□□□□ -0.33
TMEM235A6NFC5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms