Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
DDX49Q9Y6V7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
DDX49Q9Y6V7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
DDX49Q9Y6V7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC27.41■■□□□ 1.98
DDX49Q9Y6V7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
DDX49Q9Y6V7 AC239859.2-201ENST00000444165 318 ntBASIC27.4■■□□□ 1.98
DDX49Q9Y6V7 THA1P-201ENST00000590384 1145 ntBASIC27.4■■□□□ 1.98
DDX49Q9Y6V7 AC131212.1-201ENST00000613771 668 ntBASIC27.4■■□□□ 1.98
DDX49Q9Y6V7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC27.4■■□□□ 1.98
DDX49Q9Y6V7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
DDX49Q9Y6V7 AC141586.4-201ENST00000624558 1573 ntBASIC27.39■■□□□ 1.98
DDX49Q9Y6V7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
DDX49Q9Y6V7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
DDX49Q9Y6V7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
DDX49Q9Y6V7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
DDX49Q9Y6V7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC27.38■■□□□ 1.97
DDX49Q9Y6V7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC27.38■■□□□ 1.97
DDX49Q9Y6V7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
DDX49Q9Y6V7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
DDX49Q9Y6V7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
DDX49Q9Y6V7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
DDX49Q9Y6V7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC27.38■■□□□ 1.97
DDX49Q9Y6V7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
DDX49Q9Y6V7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC27.38■■□□□ 1.97
DDX49Q9Y6V7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC27.37■■□□□ 1.97
DDX49Q9Y6V7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
DDX49Q9Y6V7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
DDX49Q9Y6V7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
DDX49Q9Y6V7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC27.37■■□□□ 1.97
DDX49Q9Y6V7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC27.37■■□□□ 1.97
DDX49Q9Y6V7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
DDX49Q9Y6V7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
DDX49Q9Y6V7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
DDX49Q9Y6V7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
DDX49Q9Y6V7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
DDX49Q9Y6V7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
DDX49Q9Y6V7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
DDX49Q9Y6V7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
DDX49Q9Y6V7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
DDX49Q9Y6V7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
DDX49Q9Y6V7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
DDX49Q9Y6V7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC27.35■■□□□ 1.97
DDX49Q9Y6V7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
DDX49Q9Y6V7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC27.35■■□□□ 1.97
DDX49Q9Y6V7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
DDX49Q9Y6V7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC27.34■■□□□ 1.97
DDX49Q9Y6V7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
DDX49Q9Y6V7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
DDX49Q9Y6V7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC27.34■■□□□ 1.97
DDX49Q9Y6V7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
DDX49Q9Y6V7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
DDX49Q9Y6V7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.33■■□□□ 1.97
DDX49Q9Y6V7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC27.33■■□□□ 1.97
DDX49Q9Y6V7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC27.33■■□□□ 1.97
DDX49Q9Y6V7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC27.33■■□□□ 1.97
DDX49Q9Y6V7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.33■■□□□ 1.97
DDX49Q9Y6V7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
DDX49Q9Y6V7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC27.33■■□□□ 1.96
DDX49Q9Y6V7 AC004812.2-201ENST00000611079 2094 ntBASIC27.32■■□□□ 1.96
DDX49Q9Y6V7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
DDX49Q9Y6V7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
DDX49Q9Y6V7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
DDX49Q9Y6V7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
DDX49Q9Y6V7 AL356441.2-201ENST00000443009 864 ntBASIC27.32■■□□□ 1.96
DDX49Q9Y6V7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC27.32■■□□□ 1.96
DDX49Q9Y6V7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
DDX49Q9Y6V7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
DDX49Q9Y6V7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
DDX49Q9Y6V7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
DDX49Q9Y6V7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
DDX49Q9Y6V7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
DDX49Q9Y6V7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.3■■□□□ 1.96
DDX49Q9Y6V7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
DDX49Q9Y6V7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
DDX49Q9Y6V7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC27.29■■□□□ 1.96
DDX49Q9Y6V7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
DDX49Q9Y6V7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX49Q9Y6V7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX49Q9Y6V7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
DDX49Q9Y6V7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
DDX49Q9Y6V7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.29■■□□□ 1.96
DDX49Q9Y6V7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX49Q9Y6V7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX49Q9Y6V7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX49Q9Y6V7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX49Q9Y6V7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
DDX49Q9Y6V7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
DDX49Q9Y6V7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
DDX49Q9Y6V7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
DDX49Q9Y6V7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
DDX49Q9Y6V7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
DDX49Q9Y6V7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
DDX49Q9Y6V7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC27.28■■□□□ 1.96
DDX49Q9Y6V7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
DDX49Q9Y6V7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
DDX49Q9Y6V7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
DDX49Q9Y6V7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
DDX49Q9Y6V7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
DDX49Q9Y6V7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
DDX49Q9Y6V7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms