Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHB11Q9Y5F2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHB11Q9Y5F2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB11Q9Y5F2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB11Q9Y5F2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB11Q9Y5F2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB11Q9Y5F2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
PCDHB11Q9Y5F2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB11Q9Y5F2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB11Q9Y5F2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB11Q9Y5F2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
PCDHB11Q9Y5F2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB11Q9Y5F2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB11Q9Y5F2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCDHB11Q9Y5F2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB11Q9Y5F2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
PCDHB11Q9Y5F2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHB11Q9Y5F2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHB11Q9Y5F2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHB11Q9Y5F2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB11Q9Y5F2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB11Q9Y5F2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB11Q9Y5F2 AC131281.2-201ENST00000520478 145 ntBASIC22.48■■□□□ 1.19
PCDHB11Q9Y5F2 AL356740.2-201ENST00000601559 647 ntBASIC22.48■■□□□ 1.19
PCDHB11Q9Y5F2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB11Q9Y5F2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB11Q9Y5F2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PCDHB11Q9Y5F2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHB11Q9Y5F2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB11Q9Y5F2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB11Q9Y5F2 MIR6724-1-201ENST00000616420 92 ntBASIC22.47■■□□□ 1.19
PCDHB11Q9Y5F2 MIR6724-2-201ENST00000616483 92 ntBASIC22.47■■□□□ 1.19
PCDHB11Q9Y5F2 MIR6724-4-201ENST00000617390 92 ntBASIC22.47■■□□□ 1.19
PCDHB11Q9Y5F2 MIR6724-3-201ENST00000622482 92 ntBASIC22.47■■□□□ 1.19
PCDHB11Q9Y5F2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB11Q9Y5F2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB11Q9Y5F2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB11Q9Y5F2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB11Q9Y5F2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHB11Q9Y5F2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHB11Q9Y5F2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHB11Q9Y5F2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHB11Q9Y5F2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PCDHB11Q9Y5F2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB11Q9Y5F2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB11Q9Y5F2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB11Q9Y5F2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB11Q9Y5F2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
PCDHB11Q9Y5F2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
PCDHB11Q9Y5F2 AL117332.1-201ENST00000622628 974 ntBASIC22.45■■□□□ 1.18
PCDHB11Q9Y5F2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHB11Q9Y5F2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB11Q9Y5F2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHB11Q9Y5F2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
PCDHB11Q9Y5F2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHB11Q9Y5F2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB11Q9Y5F2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHB11Q9Y5F2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 MIR3621-201ENST00000580529 85 ntBASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB11Q9Y5F2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB11Q9Y5F2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHB11Q9Y5F2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB11Q9Y5F2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB11Q9Y5F2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PCDHB11Q9Y5F2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB11Q9Y5F2 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHB11Q9Y5F2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB11Q9Y5F2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB11Q9Y5F2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB11Q9Y5F2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB11Q9Y5F2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHB11Q9Y5F2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB11Q9Y5F2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB11Q9Y5F2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHB11Q9Y5F2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB11Q9Y5F2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB11Q9Y5F2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.4■■□□□ 1.18
PCDHB11Q9Y5F2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB11Q9Y5F2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHB11Q9Y5F2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
PCDHB11Q9Y5F2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHB11Q9Y5F2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHB11Q9Y5F2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHB11Q9Y5F2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB11Q9Y5F2 HLA-L-211ENST00000482052 1765 ntBASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms