Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TPRKBQ9Y3C4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TPRKBQ9Y3C4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TPRKBQ9Y3C4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.95■□□□□ 0.94
TPRKBQ9Y3C4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
TPRKBQ9Y3C4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TPRKBQ9Y3C4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TPRKBQ9Y3C4 ECEL1P1-201ENST00000373592 1742 ntBASIC20.95■□□□□ 0.94
TPRKBQ9Y3C4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TPRKBQ9Y3C4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TPRKBQ9Y3C4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPRKBQ9Y3C4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPRKBQ9Y3C4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPRKBQ9Y3C4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.94■□□□□ 0.94
TPRKBQ9Y3C4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPRKBQ9Y3C4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPRKBQ9Y3C4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPRKBQ9Y3C4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPRKBQ9Y3C4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPRKBQ9Y3C4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.93■□□□□ 0.94
TPRKBQ9Y3C4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.93■□□□□ 0.94
TPRKBQ9Y3C4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPRKBQ9Y3C4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TPRKBQ9Y3C4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPRKBQ9Y3C4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.93■□□□□ 0.94
TPRKBQ9Y3C4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TPRKBQ9Y3C4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPRKBQ9Y3C4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TPRKBQ9Y3C4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TPRKBQ9Y3C4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.93■□□□□ 0.94
TPRKBQ9Y3C4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPRKBQ9Y3C4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPRKBQ9Y3C4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.93■□□□□ 0.94
TPRKBQ9Y3C4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPRKBQ9Y3C4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TPRKBQ9Y3C4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPRKBQ9Y3C4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.92■□□□□ 0.94
TPRKBQ9Y3C4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TPRKBQ9Y3C4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TPRKBQ9Y3C4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPRKBQ9Y3C4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.92■□□□□ 0.94
TPRKBQ9Y3C4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPRKBQ9Y3C4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPRKBQ9Y3C4 AC092068.2-201ENST00000590491 1708 ntBASIC20.92■□□□□ 0.94
TPRKBQ9Y3C4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPRKBQ9Y3C4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.92■□□□□ 0.94
TPRKBQ9Y3C4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TPRKBQ9Y3C4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TPRKBQ9Y3C4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPRKBQ9Y3C4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPRKBQ9Y3C4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPRKBQ9Y3C4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPRKBQ9Y3C4 AC126177.7-201ENST00000547904 679 ntBASIC20.91■□□□□ 0.94
TPRKBQ9Y3C4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.91■□□□□ 0.94
TPRKBQ9Y3C4 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.91■□□□□ 0.94
TPRKBQ9Y3C4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TPRKBQ9Y3C4 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.91■□□□□ 0.94
TPRKBQ9Y3C4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPRKBQ9Y3C4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPRKBQ9Y3C4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TPRKBQ9Y3C4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPRKBQ9Y3C4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPRKBQ9Y3C4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
TPRKBQ9Y3C4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.9■□□□□ 0.94
TPRKBQ9Y3C4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TPRKBQ9Y3C4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPRKBQ9Y3C4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPRKBQ9Y3C4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 DUX4L13-201ENST00000554103 1267 ntBASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 DUX4L15-201ENST00000611059 1267 ntBASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 DUX4L23-201ENST00000615195 1269 ntBASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 DUX4L24-201ENST00000617576 1269 ntBASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 DUX4L22-201ENST00000618238 1269 ntBASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 DUX4L20-201ENST00000619712 1269 ntBASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 DUX4L21-201ENST00000622058 1269 ntBASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 DUX4L10-201ENST00000622460 1267 ntBASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 DUX4L25-201ENST00000624915 1269 ntBASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPRKBQ9Y3C4 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.87■□□□□ 0.93
TPRKBQ9Y3C4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TPRKBQ9Y3C4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.87■□□□□ 0.93
TPRKBQ9Y3C4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPRKBQ9Y3C4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPRKBQ9Y3C4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPRKBQ9Y3C4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPRKBQ9Y3C4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms