Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUP50Q9UKX7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.85■□□□□ 0.77
NUP50Q9UKX7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUP50Q9UKX7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUP50Q9UKX7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUP50Q9UKX7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NUP50Q9UKX7 RNF165-205ENST00000588679 2904 ntBASIC19.85■□□□□ 0.77
NUP50Q9UKX7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUP50Q9UKX7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
NUP50Q9UKX7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUP50Q9UKX7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUP50Q9UKX7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NUP50Q9UKX7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NUP50Q9UKX7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NUP50Q9UKX7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
NUP50Q9UKX7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUP50Q9UKX7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NUP50Q9UKX7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.84■□□□□ 0.77
NUP50Q9UKX7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NUP50Q9UKX7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUP50Q9UKX7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NUP50Q9UKX7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUP50Q9UKX7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.83■□□□□ 0.77
NUP50Q9UKX7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NUP50Q9UKX7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.83■□□□□ 0.76
NUP50Q9UKX7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUP50Q9UKX7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUP50Q9UKX7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NUP50Q9UKX7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NUP50Q9UKX7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.82■□□□□ 0.76
NUP50Q9UKX7 AC142472.1-201ENST00000612013 1741 ntBASIC19.82■□□□□ 0.76
NUP50Q9UKX7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
NUP50Q9UKX7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUP50Q9UKX7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUP50Q9UKX7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.82■□□□□ 0.76
NUP50Q9UKX7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUP50Q9UKX7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.82■□□□□ 0.76
NUP50Q9UKX7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUP50Q9UKX7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.82■□□□□ 0.76
NUP50Q9UKX7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUP50Q9UKX7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUP50Q9UKX7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
NUP50Q9UKX7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP50Q9UKX7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUP50Q9UKX7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP50Q9UKX7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP50Q9UKX7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP50Q9UKX7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP50Q9UKX7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP50Q9UKX7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP50Q9UKX7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.81■□□□□ 0.76
NUP50Q9UKX7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.81■□□□□ 0.76
NUP50Q9UKX7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUP50Q9UKX7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.81■□□□□ 0.76
NUP50Q9UKX7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.81■□□□□ 0.76
NUP50Q9UKX7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUP50Q9UKX7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP50Q9UKX7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.8■□□□□ 0.76
NUP50Q9UKX7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.8■□□□□ 0.76
NUP50Q9UKX7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.8■□□□□ 0.76
NUP50Q9UKX7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUP50Q9UKX7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.8■□□□□ 0.76
NUP50Q9UKX7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NUP50Q9UKX7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
NUP50Q9UKX7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
NUP50Q9UKX7 PVT1_1.1-201ENST00000615125 194 ntBASIC19.8■□□□□ 0.76
NUP50Q9UKX7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUP50Q9UKX7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUP50Q9UKX7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.8■□□□□ 0.76
NUP50Q9UKX7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUP50Q9UKX7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUP50Q9UKX7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NUP50Q9UKX7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP50Q9UKX7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP50Q9UKX7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP50Q9UKX7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.79■□□□□ 0.76
NUP50Q9UKX7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP50Q9UKX7 AC103834.1-201ENST00000520383 144 ntBASIC19.79■□□□□ 0.76
NUP50Q9UKX7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.79■□□□□ 0.76
NUP50Q9UKX7 MIR4508-201ENST00000584178 70 ntBASIC19.79■□□□□ 0.76
NUP50Q9UKX7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP50Q9UKX7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP50Q9UKX7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.79■□□□□ 0.76
NUP50Q9UKX7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP50Q9UKX7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NUP50Q9UKX7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.79■□□□□ 0.76
NUP50Q9UKX7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP50Q9UKX7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP50Q9UKX7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NUP50Q9UKX7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NUP50Q9UKX7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.78■□□□□ 0.76
NUP50Q9UKX7 AC097639.1-201ENST00000565519 1891 ntBASIC19.78■□□□□ 0.76
NUP50Q9UKX7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP50Q9UKX7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NUP50Q9UKX7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.78■□□□□ 0.76
NUP50Q9UKX7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP50Q9UKX7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.78■□□□□ 0.76
NUP50Q9UKX7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NUP50Q9UKX7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP50Q9UKX7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms