Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA9Q9UGM1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA9Q9UGM1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.96■□□□□ 0.95
CHRNA9Q9UGM1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.96■□□□□ 0.95
CHRNA9Q9UGM1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.96■□□□□ 0.95
CHRNA9Q9UGM1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA9Q9UGM1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.95■□□□□ 0.94
CHRNA9Q9UGM1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA9Q9UGM1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CHRNA9Q9UGM1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA9Q9UGM1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CHRNA9Q9UGM1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA9Q9UGM1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CHRNA9Q9UGM1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA9Q9UGM1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA9Q9UGM1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA9Q9UGM1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA9Q9UGM1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CHRNA9Q9UGM1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHRNA9Q9UGM1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA9Q9UGM1 RARRES2P1-201ENST00000474487 481 ntBASIC20.94■□□□□ 0.94
CHRNA9Q9UGM1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.94■□□□□ 0.94
CHRNA9Q9UGM1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.94■□□□□ 0.94
CHRNA9Q9UGM1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
CHRNA9Q9UGM1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA9Q9UGM1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CHRNA9Q9UGM1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA9Q9UGM1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHRNA9Q9UGM1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA9Q9UGM1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.93■□□□□ 0.94
CHRNA9Q9UGM1 ABCB10P4-201ENST00000566803 2184 ntBASIC20.93■□□□□ 0.94
CHRNA9Q9UGM1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA9Q9UGM1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA9Q9UGM1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA9Q9UGM1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRNA9Q9UGM1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA9Q9UGM1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.92■□□□□ 0.94
CHRNA9Q9UGM1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CHRNA9Q9UGM1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRNA9Q9UGM1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
CHRNA9Q9UGM1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA9Q9UGM1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA9Q9UGM1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA9Q9UGM1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA9Q9UGM1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CHRNA9Q9UGM1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA9Q9UGM1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA9Q9UGM1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA9Q9UGM1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.9■□□□□ 0.94
CHRNA9Q9UGM1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.9■□□□□ 0.94
CHRNA9Q9UGM1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CHRNA9Q9UGM1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.9■□□□□ 0.94
CHRNA9Q9UGM1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CHRNA9Q9UGM1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CHRNA9Q9UGM1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
CHRNA9Q9UGM1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.89■□□□□ 0.94
CHRNA9Q9UGM1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CHRNA9Q9UGM1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA9Q9UGM1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CHRNA9Q9UGM1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA9Q9UGM1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.89■□□□□ 0.93
CHRNA9Q9UGM1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
CHRNA9Q9UGM1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA9Q9UGM1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA9Q9UGM1 AF131216.4-201ENST00000638924 1588 ntBASIC20.89■□□□□ 0.93
CHRNA9Q9UGM1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.88■□□□□ 0.93
CHRNA9Q9UGM1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA9Q9UGM1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA9Q9UGM1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA9Q9UGM1 AL161729.1-201ENST00000604104 1402 ntBASIC20.87■□□□□ 0.93
CHRNA9Q9UGM1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA9Q9UGM1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA9Q9UGM1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.87■□□□□ 0.93
CHRNA9Q9UGM1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.87■□□□□ 0.93
CHRNA9Q9UGM1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA9Q9UGM1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.87■□□□□ 0.93
CHRNA9Q9UGM1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CHRNA9Q9UGM1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA9Q9UGM1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA9Q9UGM1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA9Q9UGM1 AL022069.1-201ENST00000568025 1636 ntBASIC20.86■□□□□ 0.93
CHRNA9Q9UGM1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA9Q9UGM1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA9Q9UGM1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.86■□□□□ 0.93
CHRNA9Q9UGM1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CHRNA9Q9UGM1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.86■□□□□ 0.93
CHRNA9Q9UGM1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA9Q9UGM1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA9Q9UGM1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA9Q9UGM1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNA9Q9UGM1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA9Q9UGM1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA9Q9UGM1 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNA9Q9UGM1 AC137630.3-201ENST00000607245 391 ntBASIC20.85■□□□□ 0.93
CHRNA9Q9UGM1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA9Q9UGM1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA9Q9UGM1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA9Q9UGM1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA9Q9UGM1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA9Q9UGM1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms