Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN1Q9P244 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN1Q9P244 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN1Q9P244 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN1Q9P244 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN1Q9P244 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
LRFN1Q9P244 AL022069.1-201ENST00000568025 1636 ntBASIC21.12■□□□□ 0.97
LRFN1Q9P244 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
LRFN1Q9P244 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.12■□□□□ 0.97
LRFN1Q9P244 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.12■□□□□ 0.97
LRFN1Q9P244 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN1Q9P244 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN1Q9P244 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN1Q9P244 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.11■□□□□ 0.97
LRFN1Q9P244 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN1Q9P244 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.11■□□□□ 0.97
LRFN1Q9P244 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LRFN1Q9P244 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN1Q9P244 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN1Q9P244 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN1Q9P244 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.1■□□□□ 0.97
LRFN1Q9P244 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.1■□□□□ 0.97
LRFN1Q9P244 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN1Q9P244 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN1Q9P244 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN1Q9P244 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN1Q9P244 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.1■□□□□ 0.97
LRFN1Q9P244 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
LRFN1Q9P244 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRFN1Q9P244 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.09■□□□□ 0.97
LRFN1Q9P244 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.09■□□□□ 0.97
LRFN1Q9P244 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRFN1Q9P244 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LRFN1Q9P244 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRFN1Q9P244 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRFN1Q9P244 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.08■□□□□ 0.97
LRFN1Q9P244 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.08■□□□□ 0.97
LRFN1Q9P244 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRFN1Q9P244 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRFN1Q9P244 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.08■□□□□ 0.97
LRFN1Q9P244 AC096631.2-201ENST00000436136 790 ntBASIC21.08■□□□□ 0.97
LRFN1Q9P244 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.08■□□□□ 0.97
LRFN1Q9P244 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRFN1Q9P244 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.08■□□□□ 0.97
LRFN1Q9P244 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRFN1Q9P244 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRFN1Q9P244 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRFN1Q9P244 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRFN1Q9P244 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRFN1Q9P244 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRFN1Q9P244 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.07■□□□□ 0.96
LRFN1Q9P244 MIR638-201ENST00000385237 100 ntBASIC21.07■□□□□ 0.96
LRFN1Q9P244 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRFN1Q9P244 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRFN1Q9P244 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.07■□□□□ 0.96
LRFN1Q9P244 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRFN1Q9P244 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRFN1Q9P244 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRFN1Q9P244 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRFN1Q9P244 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.06■□□□□ 0.96
LRFN1Q9P244 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.06■□□□□ 0.96
LRFN1Q9P244 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRFN1Q9P244 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.06■□□□□ 0.96
LRFN1Q9P244 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.05■□□□□ 0.96
LRFN1Q9P244 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRFN1Q9P244 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.05■□□□□ 0.96
LRFN1Q9P244 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRFN1Q9P244 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.05■□□□□ 0.96
LRFN1Q9P244 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.05■□□□□ 0.96
LRFN1Q9P244 AC110285.6-201ENST00000617652 491 ntBASIC21.05■□□□□ 0.96
LRFN1Q9P244 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRFN1Q9P244 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRFN1Q9P244 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRFN1Q9P244 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.04■□□□□ 0.96
LRFN1Q9P244 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRFN1Q9P244 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRFN1Q9P244 SRD5A1P1-201ENST00000442297 786 ntBASIC21.04■□□□□ 0.96
LRFN1Q9P244 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRFN1Q9P244 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRFN1Q9P244 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LRFN1Q9P244 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRFN1Q9P244 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRFN1Q9P244 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRFN1Q9P244 HLA-L-211ENST00000482052 1765 ntBASIC21.03■□□□□ 0.96
LRFN1Q9P244 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRFN1Q9P244 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRFN1Q9P244 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.03■□□□□ 0.96
LRFN1Q9P244 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.03■□□□□ 0.96
LRFN1Q9P244 AC022211.4-201ENST00000625094 2161 ntBASIC21.03■□□□□ 0.96
LRFN1Q9P244 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRFN1Q9P244 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRFN1Q9P244 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRFN1Q9P244 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRFN1Q9P244 AC135731.1-201ENST00000569415 2548 ntBASIC21.02■□□□□ 0.96
LRFN1Q9P244 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRFN1Q9P244 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRFN1Q9P244 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.02■□□□□ 0.96
LRFN1Q9P244 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LRFN1Q9P244 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRFN1Q9P244 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms