Protein–RNA interactions for Protein: Q9NY12

GAR1, H/ACA ribonucleoprotein complex subunit 1, humanhuman

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1Q9NY12 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAR1Q9NY12 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
GAR1Q9NY12 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
GAR1Q9NY12 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.46■□□□□ 0.55
GAR1Q9NY12 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.46■□□□□ 0.55
GAR1Q9NY12 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAR1Q9NY12 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.46■□□□□ 0.55
GAR1Q9NY12 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAR1Q9NY12 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAR1Q9NY12 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAR1Q9NY12 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAR1Q9NY12 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAR1Q9NY12 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GAR1Q9NY12 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
GAR1Q9NY12 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
GAR1Q9NY12 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.46■□□□□ 0.55
GAR1Q9NY12 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAR1Q9NY12 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GAR1Q9NY12 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAR1Q9NY12 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.46■□□□□ 0.55
GAR1Q9NY12 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAR1Q9NY12 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GAR1Q9NY12 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
GAR1Q9NY12 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
GAR1Q9NY12 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAR1Q9NY12 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
GAR1Q9NY12 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAR1Q9NY12 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
GAR1Q9NY12 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GAR1Q9NY12 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAR1Q9NY12 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAR1Q9NY12 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.45■□□□□ 0.54
GAR1Q9NY12 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.45■□□□□ 0.54
GAR1Q9NY12 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAR1Q9NY12 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.45■□□□□ 0.54
GAR1Q9NY12 LINC00565-201ENST00000562710 2331 ntBASIC18.45■□□□□ 0.54
GAR1Q9NY12 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAR1Q9NY12 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAR1Q9NY12 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAR1Q9NY12 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAR1Q9NY12 ABCB10P4-201ENST00000566803 2184 ntBASIC18.44■□□□□ 0.54
GAR1Q9NY12 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
GAR1Q9NY12 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
GAR1Q9NY12 RARRES2P1-201ENST00000474487 481 ntBASIC18.44■□□□□ 0.54
GAR1Q9NY12 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAR1Q9NY12 AC022211.4-201ENST00000625094 2161 ntBASIC18.44■□□□□ 0.54
GAR1Q9NY12 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.43■□□□□ 0.54
GAR1Q9NY12 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
GAR1Q9NY12 AC138932.3-201ENST00000567634 1902 ntBASIC18.43■□□□□ 0.54
GAR1Q9NY12 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GAR1Q9NY12 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
GAR1Q9NY12 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GAR1Q9NY12 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.43■□□□□ 0.54
GAR1Q9NY12 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GAR1Q9NY12 AC133552.2-201ENST00000619106 1032 ntBASIC18.43■□□□□ 0.54
GAR1Q9NY12 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
GAR1Q9NY12 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GAR1Q9NY12 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.43■□□□□ 0.54
GAR1Q9NY12 AP003733.4-201ENST00000623785 1697 ntBASIC18.43■□□□□ 0.54
GAR1Q9NY12 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GAR1Q9NY12 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
GAR1Q9NY12 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GAR1Q9NY12 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GAR1Q9NY12 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GAR1Q9NY12 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GAR1Q9NY12 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.42■□□□□ 0.54
GAR1Q9NY12 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
GAR1Q9NY12 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.42■□□□□ 0.54
GAR1Q9NY12 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
GAR1Q9NY12 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GAR1Q9NY12 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GAR1Q9NY12 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
GAR1Q9NY12 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GAR1Q9NY12 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GAR1Q9NY12 C1orf229-201ENST00000623686 2258 ntBASIC18.41■□□□□ 0.54
GAR1Q9NY12 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.41■□□□□ 0.54
GAR1Q9NY12 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.41■□□□□ 0.54
GAR1Q9NY12 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GAR1Q9NY12 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.41■□□□□ 0.54
GAR1Q9NY12 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.41■□□□□ 0.54
GAR1Q9NY12 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GAR1Q9NY12 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
GAR1Q9NY12 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GAR1Q9NY12 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.4■□□□□ 0.54
GAR1Q9NY12 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAR1Q9NY12 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
GAR1Q9NY12 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GAR1Q9NY12 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GAR1Q9NY12 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAR1Q9NY12 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.4■□□□□ 0.54
GAR1Q9NY12 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAR1Q9NY12 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAR1Q9NY12 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAR1Q9NY12 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
GAR1Q9NY12 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAR1Q9NY12 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
GAR1Q9NY12 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
GAR1Q9NY12 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
GAR1Q9NY12 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GAR1Q9NY12 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms