Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMG20AQ9NP66 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HMG20AQ9NP66 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HMG20AQ9NP66 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HMG20AQ9NP66 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMG20AQ9NP66 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMG20AQ9NP66 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMG20AQ9NP66 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMG20AQ9NP66 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMG20AQ9NP66 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMG20AQ9NP66 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMG20AQ9NP66 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HMG20AQ9NP66 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HMG20AQ9NP66 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMG20AQ9NP66 FOXO3B-201ENST00000395675 1928 ntBASIC20.76■□□□□ 0.91
HMG20AQ9NP66 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HMG20AQ9NP66 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMG20AQ9NP66 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
HMG20AQ9NP66 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.75■□□□□ 0.91
HMG20AQ9NP66 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.75■□□□□ 0.91
HMG20AQ9NP66 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMG20AQ9NP66 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.75■□□□□ 0.91
HMG20AQ9NP66 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.75■□□□□ 0.91
HMG20AQ9NP66 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMG20AQ9NP66 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.75■□□□□ 0.91
HMG20AQ9NP66 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMG20AQ9NP66 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMG20AQ9NP66 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20AQ9NP66 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20AQ9NP66 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.74■□□□□ 0.91
HMG20AQ9NP66 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
HMG20AQ9NP66 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20AQ9NP66 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20AQ9NP66 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20AQ9NP66 MIR3648-2-201ENST00000581792 180 ntBASIC20.74■□□□□ 0.91
HMG20AQ9NP66 MIR3648-1-201ENST00000615959 180 ntBASIC20.74■□□□□ 0.91
HMG20AQ9NP66 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.74■□□□□ 0.91
HMG20AQ9NP66 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20AQ9NP66 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HMG20AQ9NP66 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.74■□□□□ 0.91
HMG20AQ9NP66 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20AQ9NP66 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMG20AQ9NP66 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMG20AQ9NP66 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.73■□□□□ 0.91
HMG20AQ9NP66 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HMG20AQ9NP66 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMG20AQ9NP66 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HMG20AQ9NP66 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMG20AQ9NP66 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMG20AQ9NP66 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HMG20AQ9NP66 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HMG20AQ9NP66 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMG20AQ9NP66 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
HMG20AQ9NP66 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMG20AQ9NP66 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMG20AQ9NP66 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMG20AQ9NP66 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMG20AQ9NP66 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMG20AQ9NP66 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMG20AQ9NP66 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.72■□□□□ 0.91
HMG20AQ9NP66 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMG20AQ9NP66 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.72■□□□□ 0.91
HMG20AQ9NP66 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
HMG20AQ9NP66 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.72■□□□□ 0.91
HMG20AQ9NP66 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
HMG20AQ9NP66 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMG20AQ9NP66 GUSBP5-202ENST00000510805 1989 ntBASIC20.72■□□□□ 0.91
HMG20AQ9NP66 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HMG20AQ9NP66 AL121603.2-201ENST00000557373 2117 ntBASIC20.71■□□□□ 0.91
HMG20AQ9NP66 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HMG20AQ9NP66 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMG20AQ9NP66 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.71■□□□□ 0.91
HMG20AQ9NP66 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMG20AQ9NP66 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HMG20AQ9NP66 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.7■□□□□ 0.91
HMG20AQ9NP66 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.7■□□□□ 0.9
HMG20AQ9NP66 DUSP8P3-201ENST00000399571 1760 ntBASIC20.7■□□□□ 0.9
HMG20AQ9NP66 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HMG20AQ9NP66 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMG20AQ9NP66 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HMG20AQ9NP66 AL359258.2-201ENST00000564063 1566 ntBASIC20.7■□□□□ 0.9
HMG20AQ9NP66 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMG20AQ9NP66 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HMG20AQ9NP66 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMG20AQ9NP66 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMG20AQ9NP66 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMG20AQ9NP66 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMG20AQ9NP66 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.69■□□□□ 0.9
HMG20AQ9NP66 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20AQ9NP66 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20AQ9NP66 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20AQ9NP66 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20AQ9NP66 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.69■□□□□ 0.9
HMG20AQ9NP66 ECEL1P1-201ENST00000373592 1742 ntBASIC20.69■□□□□ 0.9
HMG20AQ9NP66 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HMG20AQ9NP66 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.68■□□□□ 0.9
HMG20AQ9NP66 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HMG20AQ9NP66 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.68■□□□□ 0.9
HMG20AQ9NP66 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMG20AQ9NP66 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms