Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NEUROD4Q9HD90 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.64■■□□□ 1.06
NEUROD4Q9HD90 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.64■■□□□ 1.06
NEUROD4Q9HD90 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NEUROD4Q9HD90 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NEUROD4Q9HD90 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NEUROD4Q9HD90 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NEUROD4Q9HD90 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
NEUROD4Q9HD90 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NEUROD4Q9HD90 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NEUROD4Q9HD90 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.64■■□□□ 1.05
NEUROD4Q9HD90 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEUROD4Q9HD90 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEUROD4Q9HD90 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEUROD4Q9HD90 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.63■■□□□ 1.05
NEUROD4Q9HD90 AL022069.1-201ENST00000568025 1636 ntBASIC21.63■■□□□ 1.05
NEUROD4Q9HD90 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEUROD4Q9HD90 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
NEUROD4Q9HD90 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.63■■□□□ 1.05
NEUROD4Q9HD90 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.63■■□□□ 1.05
NEUROD4Q9HD90 BHLHE23-202ENST00000612929 1109 ntBASIC21.63■■□□□ 1.05
NEUROD4Q9HD90 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NEUROD4Q9HD90 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.63■■□□□ 1.05
NEUROD4Q9HD90 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NEUROD4Q9HD90 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NEUROD4Q9HD90 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEUROD4Q9HD90 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEUROD4Q9HD90 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.62■■□□□ 1.05
NEUROD4Q9HD90 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEUROD4Q9HD90 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEUROD4Q9HD90 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEUROD4Q9HD90 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
NEUROD4Q9HD90 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEUROD4Q9HD90 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEUROD4Q9HD90 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.62■■□□□ 1.05
NEUROD4Q9HD90 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEUROD4Q9HD90 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEUROD4Q9HD90 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NEUROD4Q9HD90 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NEUROD4Q9HD90 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NEUROD4Q9HD90 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NEUROD4Q9HD90 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.61■■□□□ 1.05
NEUROD4Q9HD90 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.61■■□□□ 1.05
NEUROD4Q9HD90 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NEUROD4Q9HD90 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NEUROD4Q9HD90 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NEUROD4Q9HD90 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NEUROD4Q9HD90 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NEUROD4Q9HD90 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NEUROD4Q9HD90 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.6■■□□□ 1.05
NEUROD4Q9HD90 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NEUROD4Q9HD90 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NEUROD4Q9HD90 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
NEUROD4Q9HD90 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NEUROD4Q9HD90 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.6■■□□□ 1.05
NEUROD4Q9HD90 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NEUROD4Q9HD90 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NEUROD4Q9HD90 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.59■■□□□ 1.05
NEUROD4Q9HD90 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NEUROD4Q9HD90 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NEUROD4Q9HD90 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.59■■□□□ 1.05
NEUROD4Q9HD90 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.59■■□□□ 1.05
NEUROD4Q9HD90 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.59■■□□□ 1.05
NEUROD4Q9HD90 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.59■■□□□ 1.05
NEUROD4Q9HD90 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
NEUROD4Q9HD90 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NEUROD4Q9HD90 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NEUROD4Q9HD90 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
NEUROD4Q9HD90 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.58■■□□□ 1.05
NEUROD4Q9HD90 DUSP8P5-201ENST00000422884 1815 ntBASIC21.58■■□□□ 1.05
NEUROD4Q9HD90 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.58■■□□□ 1.05
NEUROD4Q9HD90 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
NEUROD4Q9HD90 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
NEUROD4Q9HD90 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
NEUROD4Q9HD90 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NEUROD4Q9HD90 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.58■■□□□ 1.04
NEUROD4Q9HD90 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NEUROD4Q9HD90 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NEUROD4Q9HD90 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
NEUROD4Q9HD90 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
NEUROD4Q9HD90 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NEUROD4Q9HD90 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.57■■□□□ 1.04
NEUROD4Q9HD90 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.57■■□□□ 1.04
NEUROD4Q9HD90 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NEUROD4Q9HD90 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
NEUROD4Q9HD90 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEUROD4Q9HD90 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEUROD4Q9HD90 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NEUROD4Q9HD90 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.56■■□□□ 1.04
NEUROD4Q9HD90 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.56■■□□□ 1.04
NEUROD4Q9HD90 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NEUROD4Q9HD90 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NEUROD4Q9HD90 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NEUROD4Q9HD90 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.55■■□□□ 1.04
NEUROD4Q9HD90 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.55■■□□□ 1.04
NEUROD4Q9HD90 AC120024.1-201ENST00000562672 995 ntBASIC21.55■■□□□ 1.04
NEUROD4Q9HD90 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.55■■□□□ 1.04
NEUROD4Q9HD90 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NEUROD4Q9HD90 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.55■■□□□ 1.04
NEUROD4Q9HD90 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms