Protein–RNA interactions for Protein: Q9H2L4

TMEM60, Transmembrane protein 60, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM60Q9H2L4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
TMEM60Q9H2L4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
TMEM60Q9H2L4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
TMEM60Q9H2L4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.08■■□□□ 1.77
TMEM60Q9H2L4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.08■■□□□ 1.77
TMEM60Q9H2L4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.08■■□□□ 1.77
TMEM60Q9H2L4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
TMEM60Q9H2L4 AC021242.3-201ENST00000607598 1377 ntBASIC26.07■■□□□ 1.76
TMEM60Q9H2L4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM60Q9H2L4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM60Q9H2L4 AL022069.1-201ENST00000568025 1636 ntBASIC26.07■■□□□ 1.76
TMEM60Q9H2L4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM60Q9H2L4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.07■■□□□ 1.76
TMEM60Q9H2L4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM60Q9H2L4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM60Q9H2L4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.07■■□□□ 1.76
TMEM60Q9H2L4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TMEM60Q9H2L4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TMEM60Q9H2L4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
TMEM60Q9H2L4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
TMEM60Q9H2L4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TMEM60Q9H2L4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TMEM60Q9H2L4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TMEM60Q9H2L4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TMEM60Q9H2L4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.05■■□□□ 1.76
TMEM60Q9H2L4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TMEM60Q9H2L4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.04■■□□□ 1.76
TMEM60Q9H2L4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.04■■□□□ 1.76
TMEM60Q9H2L4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.04■■□□□ 1.76
TMEM60Q9H2L4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TMEM60Q9H2L4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.04■■□□□ 1.76
TMEM60Q9H2L4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.04■■□□□ 1.76
TMEM60Q9H2L4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.04■■□□□ 1.76
TMEM60Q9H2L4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
TMEM60Q9H2L4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TMEM60Q9H2L4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TMEM60Q9H2L4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM60Q9H2L4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.03■■□□□ 1.76
TMEM60Q9H2L4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM60Q9H2L4 BX664725.1-201ENST00000438252 379 ntBASIC26.03■■□□□ 1.76
TMEM60Q9H2L4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.03■■□□□ 1.76
TMEM60Q9H2L4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.03■■□□□ 1.76
TMEM60Q9H2L4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
TMEM60Q9H2L4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TMEM60Q9H2L4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TMEM60Q9H2L4 AC239859.2-201ENST00000444165 318 ntBASIC26.02■■□□□ 1.76
TMEM60Q9H2L4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TMEM60Q9H2L4 AL035685.1-201ENST00000636663 812 ntBASIC26.02■■□□□ 1.76
TMEM60Q9H2L4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TMEM60Q9H2L4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
TMEM60Q9H2L4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM60Q9H2L4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.01■■□□□ 1.75
TMEM60Q9H2L4 AC004448.1-201ENST00000458332 883 ntBASIC26.01■■□□□ 1.75
TMEM60Q9H2L4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.01■■□□□ 1.75
TMEM60Q9H2L4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM60Q9H2L4 AL161729.1-201ENST00000604104 1402 ntBASIC26.01■■□□□ 1.75
TMEM60Q9H2L4 SNX5-217ENST00000606557 1087 ntBASIC26.01■■□□□ 1.75
TMEM60Q9H2L4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.01■■□□□ 1.75
TMEM60Q9H2L4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
TMEM60Q9H2L4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26■■□□□ 1.75
TMEM60Q9H2L4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26■■□□□ 1.75
TMEM60Q9H2L4 Z92544.1-202ENST00000571933 1220 ntBASIC26■■□□□ 1.75
TMEM60Q9H2L4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26■■□□□ 1.75
TMEM60Q9H2L4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26■■□□□ 1.75
TMEM60Q9H2L4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26■■□□□ 1.75
TMEM60Q9H2L4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TMEM60Q9H2L4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TMEM60Q9H2L4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TMEM60Q9H2L4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TMEM60Q9H2L4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TMEM60Q9H2L4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
TMEM60Q9H2L4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.99■■□□□ 1.75
TMEM60Q9H2L4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
TMEM60Q9H2L4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TMEM60Q9H2L4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TMEM60Q9H2L4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.99■■□□□ 1.75
TMEM60Q9H2L4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TMEM60Q9H2L4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.98■■□□□ 1.75
TMEM60Q9H2L4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TMEM60Q9H2L4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TMEM60Q9H2L4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TMEM60Q9H2L4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.98■■□□□ 1.75
TMEM60Q9H2L4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.98■■□□□ 1.75
TMEM60Q9H2L4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.98■■□□□ 1.75
TMEM60Q9H2L4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.75
TMEM60Q9H2L4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
TMEM60Q9H2L4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TMEM60Q9H2L4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TMEM60Q9H2L4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TMEM60Q9H2L4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TMEM60Q9H2L4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TMEM60Q9H2L4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TMEM60Q9H2L4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.97■■□□□ 1.75
TMEM60Q9H2L4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
TMEM60Q9H2L4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TMEM60Q9H2L4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TMEM60Q9H2L4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TMEM60Q9H2L4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TMEM60Q9H2L4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.96■■□□□ 1.75
TMEM60Q9H2L4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms