Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
VPS33BQ9H267 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
VPS33BQ9H267 C17orf82-201ENST00000623772 1530 ntBASIC28.1■■■□□ 2.09
VPS33BQ9H267 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC28.1■■■□□ 2.09
VPS33BQ9H267 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
VPS33BQ9H267 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC28.1■■■□□ 2.09
VPS33BQ9H267 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
VPS33BQ9H267 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC28.1■■■□□ 2.09
VPS33BQ9H267 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
VPS33BQ9H267 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC28.09■■■□□ 2.09
VPS33BQ9H267 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC28.09■■■□□ 2.09
VPS33BQ9H267 AC233992.3-201ENST00000607491 485 ntBASIC28.09■■■□□ 2.09
VPS33BQ9H267 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
VPS33BQ9H267 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC28.09■■■□□ 2.09
VPS33BQ9H267 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
VPS33BQ9H267 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.08■■■□□ 2.09
VPS33BQ9H267 AK1-201ENST00000223836 736 ntTSL 3 BASIC28.08■■■□□ 2.09
VPS33BQ9H267 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC28.08■■■□□ 2.09
VPS33BQ9H267 BX842568.3-201ENST00000418104 571 ntBASIC28.08■■■□□ 2.09
VPS33BQ9H267 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC28.08■■■□□ 2.09
VPS33BQ9H267 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC28.08■■■□□ 2.09
VPS33BQ9H267 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.08
VPS33BQ9H267 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC28.07■■■□□ 2.08
VPS33BQ9H267 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
VPS33BQ9H267 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
VPS33BQ9H267 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
VPS33BQ9H267 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
VPS33BQ9H267 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
VPS33BQ9H267 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
VPS33BQ9H267 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
VPS33BQ9H267 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
VPS33BQ9H267 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
VPS33BQ9H267 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
VPS33BQ9H267 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
VPS33BQ9H267 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
VPS33BQ9H267 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
VPS33BQ9H267 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
VPS33BQ9H267 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
VPS33BQ9H267 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
VPS33BQ9H267 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.05■■■□□ 2.08
VPS33BQ9H267 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC28.05■■■□□ 2.08
VPS33BQ9H267 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC28.05■■■□□ 2.08
VPS33BQ9H267 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
VPS33BQ9H267 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
VPS33BQ9H267 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
VPS33BQ9H267 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
VPS33BQ9H267 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
VPS33BQ9H267 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
VPS33BQ9H267 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC28.04■■■□□ 2.08
VPS33BQ9H267 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
VPS33BQ9H267 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
VPS33BQ9H267 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
VPS33BQ9H267 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.03■■■□□ 2.08
VPS33BQ9H267 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
VPS33BQ9H267 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.02■■■□□ 2.08
VPS33BQ9H267 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.02■■■□□ 2.08
VPS33BQ9H267 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
VPS33BQ9H267 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC28.02■■■□□ 2.08
VPS33BQ9H267 AC034268.1-201ENST00000441047 882 ntBASIC28.02■■■□□ 2.08
VPS33BQ9H267 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC28.02■■■□□ 2.08
VPS33BQ9H267 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
VPS33BQ9H267 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.02■■■□□ 2.08
VPS33BQ9H267 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.01■■■□□ 2.08
VPS33BQ9H267 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
VPS33BQ9H267 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
VPS33BQ9H267 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
VPS33BQ9H267 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
VPS33BQ9H267 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
VPS33BQ9H267 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC28.01■■■□□ 2.07
VPS33BQ9H267 SP2-202ENST00000613139 908 ntTSL 5 BASIC28.01■■■□□ 2.07
VPS33BQ9H267 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC28.01■■■□□ 2.07
VPS33BQ9H267 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.01■■■□□ 2.07
VPS33BQ9H267 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
VPS33BQ9H267 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.01■■■□□ 2.07
VPS33BQ9H267 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
VPS33BQ9H267 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC28■■■□□ 2.07
VPS33BQ9H267 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
VPS33BQ9H267 AL022069.1-201ENST00000568025 1636 ntBASIC28■■■□□ 2.07
VPS33BQ9H267 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
VPS33BQ9H267 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC27.99■■■□□ 2.07
VPS33BQ9H267 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC27.99■■■□□ 2.07
VPS33BQ9H267 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
VPS33BQ9H267 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.98■■■□□ 2.07
VPS33BQ9H267 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
VPS33BQ9H267 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
VPS33BQ9H267 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
VPS33BQ9H267 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
VPS33BQ9H267 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
VPS33BQ9H267 RARRES2P11-201ENST00000635158 484 ntBASIC27.98■■■□□ 2.07
VPS33BQ9H267 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
VPS33BQ9H267 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
VPS33BQ9H267 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC27.98■■■□□ 2.07
VPS33BQ9H267 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
VPS33BQ9H267 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
VPS33BQ9H267 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC27.97■■■□□ 2.07
VPS33BQ9H267 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
VPS33BQ9H267 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC27.97■■■□□ 2.07
VPS33BQ9H267 MIR3181-201ENST00000578512 73 ntBASIC27.97■■■□□ 2.07
VPS33BQ9H267 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC27.97■■■□□ 2.07
VPS33BQ9H267 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms