Protein–RNA interactions for Protein: Q9H1Y3

OPN3, Opsin-3, humanhuman

Predicted RBP Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3Q9H1Y3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
OPN3Q9H1Y3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
OPN3Q9H1Y3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
OPN3Q9H1Y3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
OPN3Q9H1Y3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
OPN3Q9H1Y3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
OPN3Q9H1Y3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
OPN3Q9H1Y3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
OPN3Q9H1Y3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.31■□□□□ 0.84
OPN3Q9H1Y3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
OPN3Q9H1Y3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OPN3Q9H1Y3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
OPN3Q9H1Y3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
OPN3Q9H1Y3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
OPN3Q9H1Y3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
OPN3Q9H1Y3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
OPN3Q9H1Y3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
OPN3Q9H1Y3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
OPN3Q9H1Y3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.29■□□□□ 0.84
OPN3Q9H1Y3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
OPN3Q9H1Y3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
OPN3Q9H1Y3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
OPN3Q9H1Y3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
OPN3Q9H1Y3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.29■□□□□ 0.84
OPN3Q9H1Y3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
OPN3Q9H1Y3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
OPN3Q9H1Y3 AC005703.6-201ENST00000623265 1329 ntBASIC20.28■□□□□ 0.84
OPN3Q9H1Y3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.28■□□□□ 0.84
OPN3Q9H1Y3 AL022069.1-201ENST00000568025 1636 ntBASIC20.28■□□□□ 0.84
OPN3Q9H1Y3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
OPN3Q9H1Y3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
OPN3Q9H1Y3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.28■□□□□ 0.84
OPN3Q9H1Y3 AL139246.5-201ENST00000606645 996 ntBASIC20.28■□□□□ 0.84
OPN3Q9H1Y3 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.28■□□□□ 0.84
OPN3Q9H1Y3 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.28■□□□□ 0.84
OPN3Q9H1Y3 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.28■□□□□ 0.84
OPN3Q9H1Y3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
OPN3Q9H1Y3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
OPN3Q9H1Y3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
OPN3Q9H1Y3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
OPN3Q9H1Y3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
OPN3Q9H1Y3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
OPN3Q9H1Y3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.27■□□□□ 0.84
OPN3Q9H1Y3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.27■□□□□ 0.84
OPN3Q9H1Y3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
OPN3Q9H1Y3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
OPN3Q9H1Y3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
OPN3Q9H1Y3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
OPN3Q9H1Y3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.27■□□□□ 0.84
OPN3Q9H1Y3 AC096631.2-201ENST00000436136 790 ntBASIC20.27■□□□□ 0.84
OPN3Q9H1Y3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
OPN3Q9H1Y3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
OPN3Q9H1Y3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
OPN3Q9H1Y3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
OPN3Q9H1Y3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
OPN3Q9H1Y3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
OPN3Q9H1Y3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.26■□□□□ 0.83
OPN3Q9H1Y3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
OPN3Q9H1Y3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.26■□□□□ 0.83
OPN3Q9H1Y3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
OPN3Q9H1Y3 HLA-L-211ENST00000482052 1765 ntBASIC20.26■□□□□ 0.83
OPN3Q9H1Y3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
OPN3Q9H1Y3 AC022211.4-201ENST00000625094 2161 ntBASIC20.25■□□□□ 0.83
OPN3Q9H1Y3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
OPN3Q9H1Y3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
OPN3Q9H1Y3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.25■□□□□ 0.83
OPN3Q9H1Y3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
OPN3Q9H1Y3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
OPN3Q9H1Y3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
OPN3Q9H1Y3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.25■□□□□ 0.83
OPN3Q9H1Y3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.25■□□□□ 0.83
OPN3Q9H1Y3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.25■□□□□ 0.83
OPN3Q9H1Y3 AC110285.6-201ENST00000617652 491 ntBASIC20.25■□□□□ 0.83
OPN3Q9H1Y3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
OPN3Q9H1Y3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
OPN3Q9H1Y3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
OPN3Q9H1Y3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.24■□□□□ 0.83
OPN3Q9H1Y3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
OPN3Q9H1Y3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.24■□□□□ 0.83
OPN3Q9H1Y3 MIR638-201ENST00000385237 100 ntBASIC20.24■□□□□ 0.83
OPN3Q9H1Y3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
OPN3Q9H1Y3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.24■□□□□ 0.83
OPN3Q9H1Y3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.24■□□□□ 0.83
OPN3Q9H1Y3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
OPN3Q9H1Y3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
OPN3Q9H1Y3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.24■□□□□ 0.83
OPN3Q9H1Y3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
OPN3Q9H1Y3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
OPN3Q9H1Y3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
OPN3Q9H1Y3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.23■□□□□ 0.83
OPN3Q9H1Y3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
OPN3Q9H1Y3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPN3Q9H1Y3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
OPN3Q9H1Y3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPN3Q9H1Y3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPN3Q9H1Y3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OPN3Q9H1Y3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
OPN3Q9H1Y3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.22■□□□□ 0.83
OPN3Q9H1Y3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
OPN3Q9H1Y3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms