Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.93□□□□□ -0.183e-11■■■■■ 34.2
XRN2Q9H0D6 GTPBP1-209ENST00000484657 585 ntTSL 413.85□□□□□ -0.192e-7■■■■■ 34.2
XRN2Q9H0D6 GTPBP1-205ENST00000461428 476 ntTSL 212.11□□□□□ -0.472e-7■■■■■ 34.2
XRN2Q9H0D6 ARID1B-230ENST00000637810 5073 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.553e-7■■■■■ 34.2
XRN2Q9H0D6 ARID1B-210ENST00000635849 5830 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.783e-7■■■■■ 34.2
XRN2Q9H0D6 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.813e-7■■■■■ 34.2
XRN2Q9H0D6 ANKRD11-216ENST00000568924 587 ntTSL 415.81■□□□□ 0.122e-6■■■■■ 34.1
XRN2Q9H0D6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.385e-8■■■■■ 34.1
XRN2Q9H0D6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.195e-8■■■■■ 34.1
XRN2Q9H0D6 IMMP2L-206ENST00000452753 421 ntTSL 512.72□□□□□ -0.375e-8■■■■■ 34.1
XRN2Q9H0D6 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.265e-23■■■■■ 34.1
XRN2Q9H0D6 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.345e-23■■■■■ 34.1
XRN2Q9H0D6 SYCP2L-202ENST00000341041 3069 ntTSL 212.3□□□□□ -0.445e-23■■■■■ 34.1
XRN2Q9H0D6 SMG1P3-205ENST00000522480 4262 ntBASIC11.83□□□□□ -0.523e-13■■■■■ 34
XRN2Q9H0D6 CAMTA1-213ENST00000490738 538 ntTSL 232.99■■■□□ 2.872e-6■■■■■ 34
XRN2Q9H0D6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.46■■□□□ 1.832e-6■■■■■ 34
XRN2Q9H0D6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.82■■□□□ 1.562e-6■■■■■ 34
XRN2Q9H0D6 CAMTA1-209ENST00000476163 863 ntTSL 223.15■■□□□ 1.32e-6■■■■■ 34
XRN2Q9H0D6 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC10.61□□□□□ -0.712e-6■■■■■ 34
XRN2Q9H0D6 CAMTA1-202ENST00000461311 431 ntTSL 24.48□□□□□ -1.692e-6■■■■■ 34
XRN2Q9H0D6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.89■■□□□ 1.92e-11■■■■■ 34
XRN2Q9H0D6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.87■□□□□ 0.452e-11■■■■■ 34
XRN2Q9H0D6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.382e-11■■■■■ 34
XRN2Q9H0D6 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.84□□□□□ -0.032e-11■■■■■ 34
XRN2Q9H0D6 AGFG1-203ENST00000409171 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.112e-11■■■■■ 34
XRN2Q9H0D6 AC010997.4-201ENST00000609200 1890 ntTSL 1 (best) BASIC11.55□□□□□ -0.568e-8■■■■■ 33.9
XRN2Q9H0D6 TRAF3IP2-AS1-203ENST00000440001 915 ntTSL 1 (best)33.1■■■□□ 2.898e-10■■■■■ 33.9
XRN2Q9H0D6 KTN1-215ENST00000554567 730 ntTSL 532.54■■■□□ 2.81e-8■■■■■ 33.9
XRN2Q9H0D6 KTN1-221ENST00000555498 595 ntAPPRIS ALT2 TSL 324.36■■□□□ 1.491e-8■■■■■ 33.9
XRN2Q9H0D6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.59■■□□□ 1.058e-10■■■■■ 33.9
XRN2Q9H0D6 TRAF3IP2-AS1-202ENST00000438298 1106 ntTSL 214.6□□□□□ -0.078e-10■■■■■ 33.9
XRN2Q9H0D6 TRAF3IP2-AS1-210ENST00000532353 576 ntTSL 214.1□□□□□ -0.158e-10■■■■■ 33.9
XRN2Q9H0D6 TRAF3IP2-AS1-207ENST00000456352 484 ntTSL 5 BASIC11.91□□□□□ -0.58e-10■■■■■ 33.9
XRN2Q9H0D6 TRAF3IP2-AS1-206ENST00000449449 784 ntTSL 3 BASIC11.2□□□□□ -0.628e-10■■■■■ 33.9
XRN2Q9H0D6 TRAF3IP2-AS1-205ENST00000442928 548 ntTSL 4 BASIC11.1□□□□□ -0.638e-10■■■■■ 33.9
XRN2Q9H0D6 TRAF3IP2-AS1-201ENST00000420651 324 ntTSL 210.91□□□□□ -0.668e-10■■■■■ 33.9
XRN2Q9H0D6 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC9.46□□□□□ -0.98e-10■■■■■ 33.9
XRN2Q9H0D6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.621e-8■■■■■ 33.9
XRN2Q9H0D6 KTN1-225ENST00000557267 291 ntTSL 34.43□□□□□ -1.71e-8■■■■■ 33.9
XRN2Q9H0D6 KTN1-208ENST00000459737 4793 ntTSL 1 (best)2.34□□□□□ -2.031e-8■■■■■ 33.9
XRN2Q9H0D6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.091e-8■■■■■ 33.9
XRN2Q9H0D6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.161e-8■■■■■ 33.9
XRN2Q9H0D6 TRIP12-202ENST00000343290 583 ntTSL 323.37■■□□□ 1.336e-7■■■■■ 33.8
XRN2Q9H0D6 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC14.92□□□□□ -0.026e-7■■■■■ 33.8
XRN2Q9H0D6 TRIP12-208ENST00000430954 719 ntTSL 214.73□□□□□ -0.056e-7■■■■■ 33.8
XRN2Q9H0D6 TRIP12-215ENST00000479037 2938 ntTSL 1 (best)14.04□□□□□ -0.166e-7■■■■■ 33.8
XRN2Q9H0D6 TRIP12-203ENST00000389044 6405 ntTSL 1 (best) BASIC11.08□□□□□ -0.646e-7■■■■■ 33.8
XRN2Q9H0D6 TRIP12-209ENST00000435716 603 ntTSL 38.88□□□□□ -0.996e-7■■■■■ 33.8
XRN2Q9H0D6 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.336e-7■■■■■ 33.8
XRN2Q9H0D6 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.466e-7■■■■■ 33.8
XRN2Q9H0D6 KDELR2-204ENST00000462052 382 ntTSL 29.92□□□□□ -0.822e-8■■■■■ 33.7
XRN2Q9H0D6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.313e-7■■■■■ 33.7
XRN2Q9H0D6 AC004678.1-201ENST00000615016 929 ntBASIC11.25□□□□□ -0.618e-8■■■■■ 33.7
XRN2Q9H0D6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.541e-15■■■■■ 33.7
XRN2Q9H0D6 MAP2K2-208ENST00000599345 923 ntTSL 523.8■■□□□ 1.41e-15■■■■■ 33.7
XRN2Q9H0D6 MAP2K2-203ENST00000593364 872 ntTSL 522.86■■□□□ 1.251e-15■■■■■ 33.7
XRN2Q9H0D6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.88■■□□□ 1.091e-15■■■■■ 33.7
XRN2Q9H0D6 MAP2K2-210ENST00000601786 1778 ntTSL 219.86■□□□□ 0.771e-15■■■■■ 33.7
XRN2Q9H0D6 MAP2K2-211ENST00000602167 431 ntTSL 518.43■□□□□ 0.541e-15■■■■■ 33.7
XRN2Q9H0D6 MAP2K2-205ENST00000597008 866 ntTSL 211.84□□□□□ -0.511e-15■■■■■ 33.7
XRN2Q9H0D6 RPS2-211ENST00000531065 1548 ntTSL 531.95■■■□□ 2.79e-8■■■■■ 33.6
XRN2Q9H0D6 MRPL38-202ENST00000410030 535 ntTSL 431.34■■■□□ 2.616e-16■■■■■ 33.6
XRN2Q9H0D6 RPS2-207ENST00000527826 837 ntTSL 1 (best)31.22■■■□□ 2.599e-8■■■■■ 33.6
XRN2Q9H0D6 RPS2-205ENST00000527109 1030 ntTSL 1 (best)31.22■■■□□ 2.599e-8■■■■■ 33.6
XRN2Q9H0D6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.599e-8■■■■■ 33.6
XRN2Q9H0D6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.22■■■□□ 2.599e-8■■■■■ 33.6
XRN2Q9H0D6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.1■■■□□ 2.579e-8■■■■■ 33.6
XRN2Q9H0D6 RPS2-206ENST00000527302 719 ntTSL 330.29■■■□□ 2.449e-8■■■■■ 33.6
XRN2Q9H0D6 RPS2-208ENST00000527871 1243 ntTSL 1 (best)29.53■■■□□ 2.329e-8■■■■■ 33.6
XRN2Q9H0D6 RPS2-213ENST00000533161 1186 ntTSL 1 (best)29.35■■■□□ 2.299e-8■■■■■ 33.6
XRN2Q9H0D6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.96■■■□□ 2.239e-8■■■■■ 33.6
XRN2Q9H0D6 RPS2-215ENST00000533872 1114 ntTSL 528.19■■■□□ 2.19e-8■■■■■ 33.6
XRN2Q9H0D6 MRPL38-204ENST00000464758 752 ntTSL 326.47■■□□□ 1.836e-16■■■■■ 33.6
XRN2Q9H0D6 MRPL38-216ENST00000585475 580 ntTSL 525.31■■□□□ 1.646e-16■■■■■ 33.6
XRN2Q9H0D6 RPS2-204ENST00000526908 638 ntTSL 224.64■■□□□ 1.549e-8■■■■■ 33.6
XRN2Q9H0D6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.41■■□□□ 1.346e-16■■■■■ 33.6
XRN2Q9H0D6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.66■■□□□ 1.226e-16■■■■■ 33.6
XRN2Q9H0D6 MRPL38-203ENST00000461602 880 ntTSL 322.06■■□□□ 1.126e-16■■■■■ 33.6
XRN2Q9H0D6 MRPL38-214ENST00000493383 727 ntTSL 220.97■□□□□ 0.956e-16■■■■■ 33.6
XRN2Q9H0D6 MRPL38-215ENST00000494179 870 ntTSL 320.25■□□□□ 0.836e-16■■■■■ 33.6
XRN2Q9H0D6 PPP1R26-AS1-201ENST00000455039 643 ntTSL 4 BASIC13.14□□□□□ -0.319e-7■■■■■ 33.6
XRN2Q9H0D6 PPP1R26-AS1-204ENST00000605260 414 ntTSL 412.21□□□□□ -0.459e-7■■■■■ 33.6
XRN2Q9H0D6 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC10.69□□□□□ -0.76e-16■■■■■ 33.6
XRN2Q9H0D6 RPS2-217ENST00000563194 170 ntTSL 53.01□□□□□ -1.939e-8■■■■■ 33.6
XRN2Q9H0D6 RTN4-210ENST00000427710 589 ntTSL 417.53■□□□□ 0.45e-11■■■■■ 33.6
XRN2Q9H0D6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.2■□□□□ 0.821e-8■■■■■ 33.6
XRN2Q9H0D6 LRP1-207ENST00000554174 2175 ntTSL 1 (best) BASIC12.28□□□□□ -0.441e-8■■■■■ 33.6
XRN2Q9H0D6 LRP1-202ENST00000338962 2169 ntTSL 1 (best) BASIC11.92□□□□□ -0.51e-8■■■■■ 33.6
XRN2Q9H0D6 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.895e-7■■■■■ 33.5
XRN2Q9H0D6 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.065e-7■■■■■ 33.5
XRN2Q9H0D6 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.135e-7■■■■■ 33.5
XRN2Q9H0D6 CEP68-203ENST00000475851 550 ntTSL 422.4■■□□□ 1.182e-7■■■■■ 33.5
XRN2Q9H0D6 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.212e-7■■■■■ 33.5
XRN2Q9H0D6 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.42e-7■■■■■ 33.5
XRN2Q9H0D6 CEP68-205ENST00000537589 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.942e-7■■■■■ 33.5
XRN2Q9H0D6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.625e-9■■■■■ 33.5
XRN2Q9H0D6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.374e-7■■■■■ 33.5
XRN2Q9H0D6 JAG1-203ENST00000488480 1161 ntTSL 416.59■□□□□ 0.251e-6■■■■■ 33.5
XRN2Q9H0D6 DHRSX-207ENST00000478825 679 ntTSL 226.91■■□□□ 1.91e-6■■■■■ 33.3
XRN2Q9H0D6 PHF23-210ENST00000574407 497 ntTSL 225.07■■□□□ 1.65e-8■■■■■ 33.3
Retrieved 100 of 21,068 protein–RNA pairs in 60.9 ms