Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCGF1Q9BSM1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCGF1Q9BSM1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCGF1Q9BSM1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCGF1Q9BSM1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCGF1Q9BSM1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PCGF1Q9BSM1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCGF1Q9BSM1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.15■□□□□ 0.66
PCGF1Q9BSM1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.15■□□□□ 0.66
PCGF1Q9BSM1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCGF1Q9BSM1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PCGF1Q9BSM1 AC092028.1-203ENST00000608262 953 ntBASIC19.15■□□□□ 0.66
PCGF1Q9BSM1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCGF1Q9BSM1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCGF1Q9BSM1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCGF1Q9BSM1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCGF1Q9BSM1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PCGF1Q9BSM1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PCGF1Q9BSM1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCGF1Q9BSM1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCGF1Q9BSM1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCGF1Q9BSM1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.14■□□□□ 0.65
PCGF1Q9BSM1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCGF1Q9BSM1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCGF1Q9BSM1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCGF1Q9BSM1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCGF1Q9BSM1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCGF1Q9BSM1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCGF1Q9BSM1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.13■□□□□ 0.65
PCGF1Q9BSM1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.13■□□□□ 0.65
PCGF1Q9BSM1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCGF1Q9BSM1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCGF1Q9BSM1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
PCGF1Q9BSM1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCGF1Q9BSM1 AC138932.3-201ENST00000567634 1902 ntBASIC19.13■□□□□ 0.65
PCGF1Q9BSM1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCGF1Q9BSM1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCGF1Q9BSM1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PCGF1Q9BSM1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCGF1Q9BSM1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCGF1Q9BSM1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCGF1Q9BSM1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCGF1Q9BSM1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCGF1Q9BSM1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.12■□□□□ 0.65
PCGF1Q9BSM1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.12■□□□□ 0.65
PCGF1Q9BSM1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCGF1Q9BSM1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.12■□□□□ 0.65
PCGF1Q9BSM1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.12■□□□□ 0.65
PCGF1Q9BSM1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.12■□□□□ 0.65
PCGF1Q9BSM1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCGF1Q9BSM1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCGF1Q9BSM1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.12■□□□□ 0.65
PCGF1Q9BSM1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCGF1Q9BSM1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCGF1Q9BSM1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.11■□□□□ 0.65
PCGF1Q9BSM1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCGF1Q9BSM1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.11■□□□□ 0.65
PCGF1Q9BSM1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCGF1Q9BSM1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCGF1Q9BSM1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.11■□□□□ 0.65
PCGF1Q9BSM1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.11■□□□□ 0.65
PCGF1Q9BSM1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PCGF1Q9BSM1 AF131216.4-201ENST00000638924 1588 ntBASIC19.1■□□□□ 0.65
PCGF1Q9BSM1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCGF1Q9BSM1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PCGF1Q9BSM1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.1■□□□□ 0.65
PCGF1Q9BSM1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCGF1Q9BSM1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.1■□□□□ 0.65
PCGF1Q9BSM1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.1■□□□□ 0.65
PCGF1Q9BSM1 MTDHP2-201ENST00000601468 714 ntBASIC19.1■□□□□ 0.65
PCGF1Q9BSM1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCGF1Q9BSM1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.1■□□□□ 0.65
PCGF1Q9BSM1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCGF1Q9BSM1 AC010997.5-201ENST00000609182 354 ntBASIC19.09■□□□□ 0.65
PCGF1Q9BSM1 MIR6089-201ENST00000616698 64 ntBASIC19.09■□□□□ 0.65
PCGF1Q9BSM1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCGF1Q9BSM1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCGF1Q9BSM1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.09■□□□□ 0.65
PCGF1Q9BSM1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.09■□□□□ 0.65
PCGF1Q9BSM1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCGF1Q9BSM1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
PCGF1Q9BSM1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCGF1Q9BSM1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.08■□□□□ 0.65
PCGF1Q9BSM1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCGF1Q9BSM1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.08■□□□□ 0.65
PCGF1Q9BSM1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.08■□□□□ 0.65
PCGF1Q9BSM1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.08■□□□□ 0.65
PCGF1Q9BSM1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCGF1Q9BSM1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.08■□□□□ 0.64
PCGF1Q9BSM1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.08■□□□□ 0.64
PCGF1Q9BSM1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.08■□□□□ 0.64
PCGF1Q9BSM1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.08■□□□□ 0.64
PCGF1Q9BSM1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCGF1Q9BSM1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCGF1Q9BSM1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.08■□□□□ 0.64
PCGF1Q9BSM1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.08■□□□□ 0.64
PCGF1Q9BSM1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
PCGF1Q9BSM1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PCGF1Q9BSM1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.07■□□□□ 0.64
PCGF1Q9BSM1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms