Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ABCA3Q99758 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ABCA3Q99758 AL137784.2-201ENST00000607332 1000 ntBASIC31.27■■■□□ 2.6
ABCA3Q99758 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.6
ABCA3Q99758 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
ABCA3Q99758 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.26■■■□□ 2.59
ABCA3Q99758 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC31.26■■■□□ 2.59
ABCA3Q99758 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC31.26■■■□□ 2.59
ABCA3Q99758 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC31.26■■■□□ 2.59
ABCA3Q99758 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
ABCA3Q99758 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA3Q99758 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA3Q99758 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
ABCA3Q99758 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC31.25■■■□□ 2.59
ABCA3Q99758 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC31.25■■■□□ 2.59
ABCA3Q99758 AC022517.1-201ENST00000592429 346 ntBASIC31.25■■■□□ 2.59
ABCA3Q99758 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
ABCA3Q99758 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA3Q99758 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
ABCA3Q99758 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC31.24■■■□□ 2.59
ABCA3Q99758 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
ABCA3Q99758 YBX1P1-201ENST00000445822 960 ntBASIC31.24■■■□□ 2.59
ABCA3Q99758 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
ABCA3Q99758 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC31.24■■■□□ 2.59
ABCA3Q99758 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC31.23■■■□□ 2.59
ABCA3Q99758 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ABCA3Q99758 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ABCA3Q99758 SLC47A1P1-202ENST00000449666 945 ntBASIC31.22■■■□□ 2.59
ABCA3Q99758 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC31.22■■■□□ 2.59
ABCA3Q99758 AC009102.2-201ENST00000606772 1639 ntBASIC31.22■■■□□ 2.59
ABCA3Q99758 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
ABCA3Q99758 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC31.22■■■□□ 2.59
ABCA3Q99758 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ABCA3Q99758 HES6-206ENST00000409574 738 ntTSL 2 BASIC31.21■■■□□ 2.59
ABCA3Q99758 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC31.21■■■□□ 2.59
ABCA3Q99758 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ABCA3Q99758 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC31.21■■■□□ 2.59
ABCA3Q99758 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
ABCA3Q99758 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
ABCA3Q99758 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
ABCA3Q99758 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ABCA3Q99758 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.2■■■□□ 2.59
ABCA3Q99758 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
ABCA3Q99758 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
ABCA3Q99758 BX842568.3-201ENST00000418104 571 ntBASIC31.2■■■□□ 2.58
ABCA3Q99758 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
ABCA3Q99758 MPST-208ENST00000628507 698 ntTSL 5 BASIC31.2■■■□□ 2.58
ABCA3Q99758 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC31.2■■■□□ 2.58
ABCA3Q99758 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
ABCA3Q99758 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
ABCA3Q99758 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ABCA3Q99758 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC31.19■■■□□ 2.58
ABCA3Q99758 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ABCA3Q99758 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ABCA3Q99758 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ABCA3Q99758 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
ABCA3Q99758 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
ABCA3Q99758 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.18■■■□□ 2.58
ABCA3Q99758 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC31.18■■■□□ 2.58
ABCA3Q99758 AC233992.3-201ENST00000607491 485 ntBASIC31.18■■■□□ 2.58
ABCA3Q99758 RAB43-208ENST00000615093 783 ntTSL 5 BASIC31.18■■■□□ 2.58
ABCA3Q99758 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
ABCA3Q99758 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ABCA3Q99758 ERN1-208ENST00000606895 2068 ntBASIC31.17■■■□□ 2.58
ABCA3Q99758 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ABCA3Q99758 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ABCA3Q99758 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC31.16■■■□□ 2.58
ABCA3Q99758 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC31.16■■■□□ 2.58
ABCA3Q99758 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ABCA3Q99758 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
ABCA3Q99758 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ABCA3Q99758 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC31.15■■■□□ 2.58
ABCA3Q99758 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ABCA3Q99758 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC31.15■■■□□ 2.58
ABCA3Q99758 REST-206ENST00000612429 1376 ntTSL 5 BASIC31.15■■■□□ 2.58
ABCA3Q99758 REST-207ENST00000616975 1370 ntTSL 5 BASIC31.15■■■□□ 2.58
ABCA3Q99758 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ABCA3Q99758 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
ABCA3Q99758 ME3-201ENST00000323418 1068 ntTSL 5 BASIC31.15■■■□□ 2.58
ABCA3Q99758 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC31.15■■■□□ 2.58
ABCA3Q99758 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
ABCA3Q99758 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.58
ABCA3Q99758 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
ABCA3Q99758 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.14■■■□□ 2.58
ABCA3Q99758 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
ABCA3Q99758 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
ABCA3Q99758 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
ABCA3Q99758 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC31.13■■■□□ 2.57
ABCA3Q99758 AC012414.1-201ENST00000556676 535 ntBASIC31.13■■■□□ 2.57
ABCA3Q99758 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC31.13■■■□□ 2.57
ABCA3Q99758 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
ABCA3Q99758 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
ABCA3Q99758 ID1-201ENST00000376105 1233 ntBASIC31.12■■■□□ 2.57
ABCA3Q99758 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.12■■■□□ 2.57
ABCA3Q99758 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ABCA3Q99758 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.12■■■□□ 2.57
ABCA3Q99758 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.12■■■□□ 2.57
ABCA3Q99758 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
ABCA3Q99758 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ABCA3Q99758 AC241377.3-202ENST00000626088 1088 ntBASIC31.12■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms