Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 AC092068.2-201ENST00000590491 1708 ntBASIC19.93■□□□□ 0.78
GFI1Q99684 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GFI1Q99684 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.93■□□□□ 0.78
GFI1Q99684 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.93■□□□□ 0.78
GFI1Q99684 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
GFI1Q99684 ABHD17AP4-201ENST00000411545 909 ntBASIC19.93■□□□□ 0.78
GFI1Q99684 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.93■□□□□ 0.78
GFI1Q99684 ECEL1P2-201ENST00000461596 1295 ntBASIC19.93■□□□□ 0.78
GFI1Q99684 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GFI1Q99684 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
GFI1Q99684 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
GFI1Q99684 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GFI1Q99684 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GFI1Q99684 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.92■□□□□ 0.78
GFI1Q99684 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
GFI1Q99684 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GFI1Q99684 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GFI1Q99684 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
GFI1Q99684 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GFI1Q99684 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
GFI1Q99684 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GFI1Q99684 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.92■□□□□ 0.78
GFI1Q99684 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GFI1Q99684 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GFI1Q99684 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
GFI1Q99684 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GFI1Q99684 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
GFI1Q99684 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GFI1Q99684 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
GFI1Q99684 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.91■□□□□ 0.78
GFI1Q99684 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.91■□□□□ 0.78
GFI1Q99684 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
GFI1Q99684 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GFI1Q99684 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GFI1Q99684 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GFI1Q99684 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
GFI1Q99684 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GFI1Q99684 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
GFI1Q99684 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GFI1Q99684 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GFI1Q99684 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
GFI1Q99684 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
GFI1Q99684 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GFI1Q99684 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GFI1Q99684 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GFI1Q99684 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GFI1Q99684 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
GFI1Q99684 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GFI1Q99684 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.89■□□□□ 0.77
GFI1Q99684 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GFI1Q99684 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.89■□□□□ 0.77
GFI1Q99684 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
GFI1Q99684 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GFI1Q99684 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
GFI1Q99684 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.89■□□□□ 0.77
GFI1Q99684 RAP2CP1-202ENST00000605179 643 ntBASIC19.89■□□□□ 0.77
GFI1Q99684 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GFI1Q99684 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GFI1Q99684 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GFI1Q99684 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GFI1Q99684 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GFI1Q99684 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.88■□□□□ 0.77
GFI1Q99684 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GFI1Q99684 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
GFI1Q99684 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
GFI1Q99684 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GFI1Q99684 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
GFI1Q99684 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GFI1Q99684 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
GFI1Q99684 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GFI1Q99684 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
GFI1Q99684 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
GFI1Q99684 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GFI1Q99684 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
GFI1Q99684 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GFI1Q99684 AC007029.1-201ENST00000604183 313 ntBASIC19.86■□□□□ 0.77
GFI1Q99684 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GFI1Q99684 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
GFI1Q99684 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
GFI1Q99684 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
GFI1Q99684 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.86■□□□□ 0.77
GFI1Q99684 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GFI1Q99684 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GFI1Q99684 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GFI1Q99684 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GFI1Q99684 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GFI1Q99684 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GFI1Q99684 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GFI1Q99684 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GFI1Q99684 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GFI1Q99684 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.85■□□□□ 0.77
GFI1Q99684 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
GFI1Q99684 AC026202.3-201ENST00000600805 1127 ntBASIC19.85■□□□□ 0.77
GFI1Q99684 LINC00526-201ENST00000581067 1875 ntBASIC19.85■□□□□ 0.77
GFI1Q99684 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.85■□□□□ 0.77
GFI1Q99684 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GFI1Q99684 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GFI1Q99684 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GFI1Q99684 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GFI1Q99684 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms