Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.82■■□□□ 1.08
ITCHQ96J02 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
ITCHQ96J02 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ITCHQ96J02 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.82■■□□□ 1.08
ITCHQ96J02 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ITCHQ96J02 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.82■■□□□ 1.08
ITCHQ96J02 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.82■■□□□ 1.08
ITCHQ96J02 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ITCHQ96J02 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ITCHQ96J02 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.81■■□□□ 1.08
ITCHQ96J02 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.81■■□□□ 1.08
ITCHQ96J02 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ITCHQ96J02 AL592293.1-201ENST00000502889 1188 ntBASIC21.81■■□□□ 1.08
ITCHQ96J02 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.81■■□□□ 1.08
ITCHQ96J02 AC087393.1-201ENST00000582896 145 ntBASIC21.81■■□□□ 1.08
ITCHQ96J02 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ITCHQ96J02 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ITCHQ96J02 AL161729.1-201ENST00000604104 1402 ntBASIC21.8■■□□□ 1.08
ITCHQ96J02 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ITCHQ96J02 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ITCHQ96J02 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
ITCHQ96J02 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ITCHQ96J02 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ITCHQ96J02 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ITCHQ96J02 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.8■■□□□ 1.08
ITCHQ96J02 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ITCHQ96J02 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ITCHQ96J02 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ITCHQ96J02 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.8■■□□□ 1.08
ITCHQ96J02 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ITCHQ96J02 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ITCHQ96J02 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ITCHQ96J02 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
ITCHQ96J02 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ITCHQ96J02 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ITCHQ96J02 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ITCHQ96J02 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
ITCHQ96J02 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ITCHQ96J02 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ITCHQ96J02 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ITCHQ96J02 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.79■■□□□ 1.08
ITCHQ96J02 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.79■■□□□ 1.08
ITCHQ96J02 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ITCHQ96J02 SPCS2P3-201ENST00000500401 656 ntBASIC21.79■■□□□ 1.08
ITCHQ96J02 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.79■■□□□ 1.08
ITCHQ96J02 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ITCHQ96J02 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ITCHQ96J02 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ITCHQ96J02 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ITCHQ96J02 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
ITCHQ96J02 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ITCHQ96J02 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ITCHQ96J02 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ITCHQ96J02 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ITCHQ96J02 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ITCHQ96J02 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ITCHQ96J02 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ITCHQ96J02 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ITCHQ96J02 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.77■■□□□ 1.08
ITCHQ96J02 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ITCHQ96J02 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ITCHQ96J02 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ITCHQ96J02 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.77■■□□□ 1.08
ITCHQ96J02 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.77■■□□□ 1.08
ITCHQ96J02 MIR6765-201ENST00000614092 87 ntBASIC21.77■■□□□ 1.08
ITCHQ96J02 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ITCHQ96J02 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ITCHQ96J02 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
ITCHQ96J02 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ITCHQ96J02 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ITCHQ96J02 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ITCHQ96J02 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
ITCHQ96J02 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ITCHQ96J02 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ITCHQ96J02 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ITCHQ96J02 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.76■■□□□ 1.07
ITCHQ96J02 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.76■■□□□ 1.07
ITCHQ96J02 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
ITCHQ96J02 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ITCHQ96J02 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.75■■□□□ 1.07
ITCHQ96J02 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.75■■□□□ 1.07
ITCHQ96J02 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ITCHQ96J02 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ITCHQ96J02 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.75■■□□□ 1.07
ITCHQ96J02 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ITCHQ96J02 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ITCHQ96J02 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.75■■□□□ 1.07
ITCHQ96J02 C9orf163-202ENST00000624034 2573 ntBASIC21.75■■□□□ 1.07
ITCHQ96J02 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.75■■□□□ 1.07
ITCHQ96J02 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ITCHQ96J02 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.74■■□□□ 1.07
ITCHQ96J02 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.74■■□□□ 1.07
ITCHQ96J02 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ITCHQ96J02 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ITCHQ96J02 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ITCHQ96J02 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ITCHQ96J02 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ITCHQ96J02 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ITCHQ96J02 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
ITCHQ96J02 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms