Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.57■■□□□ 1.36
IFT43Q96FT9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
IFT43Q96FT9 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.57■■□□□ 1.36
IFT43Q96FT9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
IFT43Q96FT9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
IFT43Q96FT9 AL356441.2-201ENST00000443009 864 ntBASIC23.57■■□□□ 1.36
IFT43Q96FT9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.57■■□□□ 1.36
IFT43Q96FT9 AL139125.2-201ENST00000623134 1869 ntBASIC23.57■■□□□ 1.36
IFT43Q96FT9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
IFT43Q96FT9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
IFT43Q96FT9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
IFT43Q96FT9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
IFT43Q96FT9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
IFT43Q96FT9 BX664725.1-201ENST00000438252 379 ntBASIC23.56■■□□□ 1.36
IFT43Q96FT9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
IFT43Q96FT9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
IFT43Q96FT9 KRT125P-201ENST00000546827 989 ntBASIC23.56■■□□□ 1.36
IFT43Q96FT9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
IFT43Q96FT9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
IFT43Q96FT9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
IFT43Q96FT9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.56■■□□□ 1.36
IFT43Q96FT9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
IFT43Q96FT9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
IFT43Q96FT9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.55■■□□□ 1.36
IFT43Q96FT9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
IFT43Q96FT9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
IFT43Q96FT9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
IFT43Q96FT9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
IFT43Q96FT9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.55■■□□□ 1.36
IFT43Q96FT9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.55■■□□□ 1.36
IFT43Q96FT9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.55■■□□□ 1.36
IFT43Q96FT9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
IFT43Q96FT9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
IFT43Q96FT9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
IFT43Q96FT9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.54■■□□□ 1.36
IFT43Q96FT9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
IFT43Q96FT9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
IFT43Q96FT9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.54■■□□□ 1.36
IFT43Q96FT9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
IFT43Q96FT9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
IFT43Q96FT9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
IFT43Q96FT9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.53■■□□□ 1.36
IFT43Q96FT9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
IFT43Q96FT9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
IFT43Q96FT9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.53■■□□□ 1.36
IFT43Q96FT9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.53■■□□□ 1.36
IFT43Q96FT9 AC120024.1-201ENST00000562672 995 ntBASIC23.53■■□□□ 1.36
IFT43Q96FT9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.53■■□□□ 1.36
IFT43Q96FT9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
IFT43Q96FT9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
IFT43Q96FT9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
IFT43Q96FT9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
IFT43Q96FT9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
IFT43Q96FT9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.52■■□□□ 1.36
IFT43Q96FT9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.52■■□□□ 1.36
IFT43Q96FT9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
IFT43Q96FT9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
IFT43Q96FT9 HLA-L-211ENST00000482052 1765 ntBASIC23.52■■□□□ 1.36
IFT43Q96FT9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
IFT43Q96FT9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
IFT43Q96FT9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
IFT43Q96FT9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.52■■□□□ 1.35
IFT43Q96FT9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.51■■□□□ 1.35
IFT43Q96FT9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
IFT43Q96FT9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
IFT43Q96FT9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
IFT43Q96FT9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.51■■□□□ 1.35
IFT43Q96FT9 AC137630.3-201ENST00000607245 391 ntBASIC23.51■■□□□ 1.35
IFT43Q96FT9 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.51■■□□□ 1.35
IFT43Q96FT9 LINC01124-201ENST00000409786 2117 ntBASIC23.51■■□□□ 1.35
IFT43Q96FT9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
IFT43Q96FT9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
IFT43Q96FT9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
IFT43Q96FT9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.5■■□□□ 1.35
IFT43Q96FT9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
IFT43Q96FT9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.5■■□□□ 1.35
IFT43Q96FT9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
IFT43Q96FT9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
IFT43Q96FT9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.5■■□□□ 1.35
IFT43Q96FT9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
IFT43Q96FT9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
IFT43Q96FT9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.49■■□□□ 1.35
IFT43Q96FT9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
IFT43Q96FT9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.49■■□□□ 1.35
IFT43Q96FT9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
IFT43Q96FT9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
IFT43Q96FT9 MIR4787-201ENST00000607364 84 ntBASIC23.49■■□□□ 1.35
IFT43Q96FT9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
IFT43Q96FT9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
IFT43Q96FT9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
IFT43Q96FT9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
IFT43Q96FT9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
IFT43Q96FT9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.48■■□□□ 1.35
IFT43Q96FT9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
IFT43Q96FT9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
IFT43Q96FT9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
IFT43Q96FT9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.48■■□□□ 1.35
IFT43Q96FT9 CLDN5-201ENST00000403084 2357 ntBASIC23.48■■□□□ 1.35
IFT43Q96FT9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
IFT43Q96FT9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms