Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDCA5Q96FF9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CDCA5Q96FF9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDCA5Q96FF9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDCA5Q96FF9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDCA5Q96FF9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC27.33■■□□□ 1.97
CDCA5Q96FF9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC27.33■■□□□ 1.97
CDCA5Q96FF9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDCA5Q96FF9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CDCA5Q96FF9 MPST-208ENST00000628507 698 ntTSL 5 BASIC27.33■■□□□ 1.97
CDCA5Q96FF9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC27.33■■□□□ 1.97
CDCA5Q96FF9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
CDCA5Q96FF9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
CDCA5Q96FF9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC27.33■■□□□ 1.96
CDCA5Q96FF9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDCA5Q96FF9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CDCA5Q96FF9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDCA5Q96FF9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC27.32■■□□□ 1.96
CDCA5Q96FF9 GRAMD4P2-201ENST00000423297 1097 ntBASIC27.32■■□□□ 1.96
CDCA5Q96FF9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC27.32■■□□□ 1.96
CDCA5Q96FF9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDCA5Q96FF9 AL031602.1-201ENST00000633169 911 ntBASIC27.32■■□□□ 1.96
CDCA5Q96FF9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDCA5Q96FF9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
CDCA5Q96FF9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDCA5Q96FF9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.31■■□□□ 1.96
CDCA5Q96FF9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CDCA5Q96FF9 AC006455.2-201ENST00000429931 906 ntBASIC27.31■■□□□ 1.96
CDCA5Q96FF9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CDCA5Q96FF9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDCA5Q96FF9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDCA5Q96FF9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC27.3■■□□□ 1.96
CDCA5Q96FF9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDCA5Q96FF9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CDCA5Q96FF9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDCA5Q96FF9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC27.3■■□□□ 1.96
CDCA5Q96FF9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CDCA5Q96FF9 BX842568.3-201ENST00000418104 571 ntBASIC27.3■■□□□ 1.96
CDCA5Q96FF9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC27.3■■□□□ 1.96
CDCA5Q96FF9 AC092437.1-201ENST00000624794 1048 ntBASIC27.3■■□□□ 1.96
CDCA5Q96FF9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDCA5Q96FF9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDCA5Q96FF9 ERN1-208ENST00000606895 2068 ntBASIC27.29■■□□□ 1.96
CDCA5Q96FF9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDCA5Q96FF9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC27.29■■□□□ 1.96
CDCA5Q96FF9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC27.29■■□□□ 1.96
CDCA5Q96FF9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CDCA5Q96FF9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC27.29■■□□□ 1.96
CDCA5Q96FF9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDCA5Q96FF9 C17orf82-201ENST00000623772 1530 ntBASIC27.29■■□□□ 1.96
CDCA5Q96FF9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
CDCA5Q96FF9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDCA5Q96FF9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC27.28■■□□□ 1.96
CDCA5Q96FF9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
CDCA5Q96FF9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC27.28■■□□□ 1.96
CDCA5Q96FF9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC27.28■■□□□ 1.96
CDCA5Q96FF9 AC241377.3-202ENST00000626088 1088 ntBASIC27.28■■□□□ 1.96
CDCA5Q96FF9 AC241585.3-202ENST00000628937 1088 ntBASIC27.28■■□□□ 1.96
CDCA5Q96FF9 AC245100.8-202ENST00000629247 1058 ntBASIC27.28■■□□□ 1.96
CDCA5Q96FF9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDCA5Q96FF9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDCA5Q96FF9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CDCA5Q96FF9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
CDCA5Q96FF9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDCA5Q96FF9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
CDCA5Q96FF9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC27.27■■□□□ 1.96
CDCA5Q96FF9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC27.27■■□□□ 1.96
CDCA5Q96FF9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CDCA5Q96FF9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC27.27■■□□□ 1.96
CDCA5Q96FF9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CDCA5Q96FF9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
CDCA5Q96FF9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC27.27■■□□□ 1.96
CDCA5Q96FF9 YBX1P1-201ENST00000445822 960 ntBASIC27.26■■□□□ 1.95
CDCA5Q96FF9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC27.26■■□□□ 1.95
CDCA5Q96FF9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC27.26■■□□□ 1.95
CDCA5Q96FF9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.26■■□□□ 1.95
CDCA5Q96FF9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDCA5Q96FF9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.25■■□□□ 1.95
CDCA5Q96FF9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDCA5Q96FF9 AC142086.6-201ENST00000621154 1765 ntBASIC27.25■■□□□ 1.95
CDCA5Q96FF9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDCA5Q96FF9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDCA5Q96FF9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CDCA5Q96FF9 SLC47A1P1-202ENST00000449666 945 ntBASIC27.25■■□□□ 1.95
CDCA5Q96FF9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC27.25■■□□□ 1.95
CDCA5Q96FF9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC27.25■■□□□ 1.95
CDCA5Q96FF9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDCA5Q96FF9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDCA5Q96FF9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
CDCA5Q96FF9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC27.24■■□□□ 1.95
CDCA5Q96FF9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
CDCA5Q96FF9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDCA5Q96FF9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDCA5Q96FF9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC27.23■■□□□ 1.95
CDCA5Q96FF9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
CDCA5Q96FF9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC27.23■■□□□ 1.95
CDCA5Q96FF9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC27.23■■□□□ 1.95
CDCA5Q96FF9 DUX4L2-201ENST00000561772 1275 ntBASIC27.23■■□□□ 1.95
CDCA5Q96FF9 MIR3181-201ENST00000578512 73 ntBASIC27.23■■□□□ 1.95
CDCA5Q96FF9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms