Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.32■■□□□ 1.32
CLDN23Q96B33 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.32■■□□□ 1.32
CLDN23Q96B33 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.32■■□□□ 1.32
CLDN23Q96B33 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CLDN23Q96B33 AC131274.2-201ENST00000580697 1507 ntBASIC23.32■■□□□ 1.32
CLDN23Q96B33 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CLDN23Q96B33 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
CLDN23Q96B33 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.31■■□□□ 1.32
CLDN23Q96B33 BX842568.3-201ENST00000418104 571 ntBASIC23.31■■□□□ 1.32
CLDN23Q96B33 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.31■■□□□ 1.32
CLDN23Q96B33 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
CLDN23Q96B33 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CLDN23Q96B33 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLDN23Q96B33 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLDN23Q96B33 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLDN23Q96B33 AC142086.6-201ENST00000621154 1765 ntBASIC23.3■■□□□ 1.32
CLDN23Q96B33 C17orf82-201ENST00000623772 1530 ntBASIC23.3■■□□□ 1.32
CLDN23Q96B33 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLDN23Q96B33 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.3■■□□□ 1.32
CLDN23Q96B33 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.3■■□□□ 1.32
CLDN23Q96B33 IKBKGP1-201ENST00000612193 1073 ntBASIC23.3■■□□□ 1.32
CLDN23Q96B33 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CLDN23Q96B33 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.29■■□□□ 1.32
CLDN23Q96B33 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.29■■□□□ 1.32
CLDN23Q96B33 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLDN23Q96B33 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLDN23Q96B33 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.29■■□□□ 1.32
CLDN23Q96B33 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.29■■□□□ 1.32
CLDN23Q96B33 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CLDN23Q96B33 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.29■■□□□ 1.32
CLDN23Q96B33 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLDN23Q96B33 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLDN23Q96B33 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CLDN23Q96B33 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CLDN23Q96B33 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.28■■□□□ 1.32
CLDN23Q96B33 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLDN23Q96B33 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLDN23Q96B33 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLDN23Q96B33 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLDN23Q96B33 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLDN23Q96B33 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.27■■□□□ 1.32
CLDN23Q96B33 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.27■■□□□ 1.32
CLDN23Q96B33 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLDN23Q96B33 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLDN23Q96B33 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLDN23Q96B33 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CLDN23Q96B33 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.26■■□□□ 1.31
CLDN23Q96B33 KRT18P5-201ENST00000436075 1291 ntBASIC23.26■■□□□ 1.31
CLDN23Q96B33 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.26■■□□□ 1.31
CLDN23Q96B33 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.26■■□□□ 1.31
CLDN23Q96B33 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.26■■□□□ 1.31
CLDN23Q96B33 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.26■■□□□ 1.31
CLDN23Q96B33 AL137784.2-201ENST00000607332 1000 ntBASIC23.26■■□□□ 1.31
CLDN23Q96B33 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.26■■□□□ 1.31
CLDN23Q96B33 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CLDN23Q96B33 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.26■■□□□ 1.31
CLDN23Q96B33 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.26■■□□□ 1.31
CLDN23Q96B33 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
CLDN23Q96B33 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLDN23Q96B33 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.25■■□□□ 1.31
CLDN23Q96B33 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.25■■□□□ 1.31
CLDN23Q96B33 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLDN23Q96B33 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.25■■□□□ 1.31
CLDN23Q96B33 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.25■■□□□ 1.31
CLDN23Q96B33 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.25■■□□□ 1.31
CLDN23Q96B33 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.25■■□□□ 1.31
CLDN23Q96B33 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
CLDN23Q96B33 ERN1-208ENST00000606895 2068 ntBASIC23.24■■□□□ 1.31
CLDN23Q96B33 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLDN23Q96B33 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLDN23Q96B33 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.24■■□□□ 1.31
CLDN23Q96B33 YBX1P1-201ENST00000445822 960 ntBASIC23.24■■□□□ 1.31
CLDN23Q96B33 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLDN23Q96B33 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.24■■□□□ 1.31
CLDN23Q96B33 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.24■■□□□ 1.31
CLDN23Q96B33 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.24■■□□□ 1.31
CLDN23Q96B33 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CLDN23Q96B33 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLDN23Q96B33 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CLDN23Q96B33 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLDN23Q96B33 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLDN23Q96B33 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CLDN23Q96B33 AC006455.2-201ENST00000429931 906 ntBASIC23.23■■□□□ 1.31
CLDN23Q96B33 MIR3181-201ENST00000578512 73 ntBASIC23.23■■□□□ 1.31
CLDN23Q96B33 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.22■■□□□ 1.31
CLDN23Q96B33 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.22■■□□□ 1.31
CLDN23Q96B33 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLDN23Q96B33 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.22■■□□□ 1.31
CLDN23Q96B33 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.22■■□□□ 1.31
CLDN23Q96B33 SLC47A1P1-202ENST00000449666 945 ntBASIC23.22■■□□□ 1.31
CLDN23Q96B33 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CLDN23Q96B33 AC092437.1-201ENST00000624794 1048 ntBASIC23.22■■□□□ 1.31
CLDN23Q96B33 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLDN23Q96B33 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLDN23Q96B33 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CLDN23Q96B33 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
CLDN23Q96B33 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLDN23Q96B33 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.22■■□□□ 1.31
CLDN23Q96B33 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
CLDN23Q96B33 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms