Protein–RNA interactions for Protein: Q92743

HTRA1, Serine protease HTRA1, humanhuman

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1Q92743 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HTRA1Q92743 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HTRA1Q92743 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HTRA1Q92743 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HTRA1Q92743 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HTRA1Q92743 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HTRA1Q92743 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HTRA1Q92743 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HTRA1Q92743 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HTRA1Q92743 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HTRA1Q92743 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HTRA1Q92743 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HTRA1Q92743 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HTRA1Q92743 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HTRA1Q92743 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
HTRA1Q92743 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTRA1Q92743 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HTRA1Q92743 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HTRA1Q92743 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.97■□□□□ 0.95
HTRA1Q92743 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.97■□□□□ 0.95
HTRA1Q92743 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
HTRA1Q92743 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTRA1Q92743 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTRA1Q92743 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HTRA1Q92743 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTRA1Q92743 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTRA1Q92743 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HTRA1Q92743 SLC6A10P-202ENST00000431994 2058 ntBASIC20.97■□□□□ 0.95
HTRA1Q92743 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HTRA1Q92743 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.96■□□□□ 0.95
HTRA1Q92743 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.96■□□□□ 0.95
HTRA1Q92743 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
HTRA1Q92743 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HTRA1Q92743 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HTRA1Q92743 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.96■□□□□ 0.95
HTRA1Q92743 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HTRA1Q92743 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HTRA1Q92743 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HTRA1Q92743 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.95■□□□□ 0.94
HTRA1Q92743 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
HTRA1Q92743 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
HTRA1Q92743 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.94■□□□□ 0.94
HTRA1Q92743 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.94■□□□□ 0.94
HTRA1Q92743 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA1Q92743 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA1Q92743 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA1Q92743 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
HTRA1Q92743 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA1Q92743 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.94■□□□□ 0.94
HTRA1Q92743 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA1Q92743 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.94■□□□□ 0.94
HTRA1Q92743 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HTRA1Q92743 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HTRA1Q92743 AL117328.2-201ENST00000624617 1940 ntBASIC20.94■□□□□ 0.94
HTRA1Q92743 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA1Q92743 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HTRA1Q92743 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA1Q92743 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.93■□□□□ 0.94
HTRA1Q92743 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA1Q92743 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA1Q92743 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA1Q92743 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.93■□□□□ 0.94
HTRA1Q92743 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA1Q92743 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA1Q92743 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA1Q92743 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA1Q92743 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
HTRA1Q92743 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA1Q92743 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA1Q92743 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA1Q92743 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA1Q92743 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.93■□□□□ 0.94
HTRA1Q92743 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.93■□□□□ 0.94
HTRA1Q92743 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.92■□□□□ 0.94
HTRA1Q92743 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA1Q92743 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA1Q92743 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.92■□□□□ 0.94
HTRA1Q92743 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.92■□□□□ 0.94
HTRA1Q92743 LINC00565-201ENST00000562710 2331 ntBASIC20.92■□□□□ 0.94
HTRA1Q92743 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.92■□□□□ 0.94
HTRA1Q92743 BHLHE23-202ENST00000612929 1109 ntBASIC20.92■□□□□ 0.94
HTRA1Q92743 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.92■□□□□ 0.94
HTRA1Q92743 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA1Q92743 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA1Q92743 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HTRA1Q92743 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA1Q92743 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA1Q92743 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA1Q92743 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA1Q92743 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HTRA1Q92743 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA1Q92743 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HTRA1Q92743 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HTRA1Q92743 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.91■□□□□ 0.94
HTRA1Q92743 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HTRA1Q92743 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HTRA1Q92743 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HTRA1Q92743 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.91■□□□□ 0.94
HTRA1Q92743 AC018755.3-202ENST00000596210 929 ntBASIC20.91■□□□□ 0.94
HTRA1Q92743 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms