Protein–RNA interactions for Protein: Q8WTV0

SCARB1, Scavenger receptor class B member 1, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1Q8WTV0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SCARB1Q8WTV0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCARB1Q8WTV0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.18■□□□□ 0.66
SCARB1Q8WTV0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SCARB1Q8WTV0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.18■□□□□ 0.66
SCARB1Q8WTV0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCARB1Q8WTV0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCARB1Q8WTV0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCARB1Q8WTV0 AL359258.2-201ENST00000564063 1566 ntBASIC19.17■□□□□ 0.66
SCARB1Q8WTV0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCARB1Q8WTV0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SCARB1Q8WTV0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SCARB1Q8WTV0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.17■□□□□ 0.66
SCARB1Q8WTV0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SCARB1Q8WTV0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.16■□□□□ 0.66
SCARB1Q8WTV0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCARB1Q8WTV0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCARB1Q8WTV0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCARB1Q8WTV0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCARB1Q8WTV0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SCARB1Q8WTV0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCARB1Q8WTV0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCARB1Q8WTV0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCARB1Q8WTV0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCARB1Q8WTV0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCARB1Q8WTV0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCARB1Q8WTV0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SCARB1Q8WTV0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCARB1Q8WTV0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SCARB1Q8WTV0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCARB1Q8WTV0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCARB1Q8WTV0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCARB1Q8WTV0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.15■□□□□ 0.66
SCARB1Q8WTV0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCARB1Q8WTV0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SCARB1Q8WTV0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SCARB1Q8WTV0 AL137060.1-201ENST00000618151 2648 ntBASIC19.14■□□□□ 0.65
SCARB1Q8WTV0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SCARB1Q8WTV0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.14■□□□□ 0.65
SCARB1Q8WTV0 MIR7108-201ENST00000614319 87 ntBASIC19.14■□□□□ 0.65
SCARB1Q8WTV0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCARB1Q8WTV0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCARB1Q8WTV0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCARB1Q8WTV0 GUSBP5-202ENST00000510805 1989 ntBASIC19.13■□□□□ 0.65
SCARB1Q8WTV0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCARB1Q8WTV0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.13■□□□□ 0.65
SCARB1Q8WTV0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCARB1Q8WTV0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCARB1Q8WTV0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCARB1Q8WTV0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCARB1Q8WTV0 ECEL1P1-201ENST00000373592 1742 ntBASIC19.13■□□□□ 0.65
SCARB1Q8WTV0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.13■□□□□ 0.65
SCARB1Q8WTV0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.12■□□□□ 0.65
SCARB1Q8WTV0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCARB1Q8WTV0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.12■□□□□ 0.65
SCARB1Q8WTV0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCARB1Q8WTV0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.12■□□□□ 0.65
SCARB1Q8WTV0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCARB1Q8WTV0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCARB1Q8WTV0 SLC6A10P-202ENST00000431994 2058 ntBASIC19.12■□□□□ 0.65
SCARB1Q8WTV0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.12■□□□□ 0.65
SCARB1Q8WTV0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCARB1Q8WTV0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCARB1Q8WTV0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SCARB1Q8WTV0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCARB1Q8WTV0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCARB1Q8WTV0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCARB1Q8WTV0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SCARB1Q8WTV0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.1■□□□□ 0.65
SCARB1Q8WTV0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCARB1Q8WTV0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCARB1Q8WTV0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCARB1Q8WTV0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SCARB1Q8WTV0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SCARB1Q8WTV0 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.1■□□□□ 0.65
SCARB1Q8WTV0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCARB1Q8WTV0 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.1■□□□□ 0.65
SCARB1Q8WTV0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCARB1Q8WTV0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCARB1Q8WTV0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCARB1Q8WTV0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCARB1Q8WTV0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SCARB1Q8WTV0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.09■□□□□ 0.65
SCARB1Q8WTV0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SCARB1Q8WTV0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SCARB1Q8WTV0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCARB1Q8WTV0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SCARB1Q8WTV0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCARB1Q8WTV0 AC126177.7-201ENST00000547904 679 ntBASIC19.09■□□□□ 0.65
SCARB1Q8WTV0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.09■□□□□ 0.65
SCARB1Q8WTV0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCARB1Q8WTV0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCARB1Q8WTV0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.09■□□□□ 0.65
SCARB1Q8WTV0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SCARB1Q8WTV0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCARB1Q8WTV0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCARB1Q8WTV0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCARB1Q8WTV0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCARB1Q8WTV0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.08■□□□□ 0.65
SCARB1Q8WTV0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms