Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 GPX1-201ENST00000419349 1106 ntBASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPS4Y2Q8TD47 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPS4Y2Q8TD47 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.16■□□□□ 0.82
RPS4Y2Q8TD47 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.16■□□□□ 0.82
RPS4Y2Q8TD47 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPS4Y2Q8TD47 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPS4Y2Q8TD47 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPS4Y2Q8TD47 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
RPS4Y2Q8TD47 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4Y2Q8TD47 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4Y2Q8TD47 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RPS4Y2Q8TD47 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4Y2Q8TD47 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.13■□□□□ 0.81
RPS4Y2Q8TD47 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4Y2Q8TD47 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RPS4Y2Q8TD47 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4Y2Q8TD47 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 AC090877.2-201ENST00000558441 1738 ntBASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 AC233723.2-201ENST00000623798 2106 ntBASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4Y2Q8TD47 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RPS4Y2Q8TD47 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4Y2Q8TD47 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4Y2Q8TD47 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.1■□□□□ 0.81
RPS4Y2Q8TD47 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
RPS4Y2Q8TD47 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 RNF126P1-201ENST00000567452 1320 ntBASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPS4Y2Q8TD47 CLDN5-201ENST00000403084 2357 ntBASIC20.08■□□□□ 0.8
RPS4Y2Q8TD47 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.08■□□□□ 0.8
RPS4Y2Q8TD47 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPS4Y2Q8TD47 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms