Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 GPX1-201ENST00000419349 1106 ntBASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.17■□□□□ 0.82
RPS4Y2Q8TD47 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPS4Y2Q8TD47 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPS4Y2Q8TD47 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.16■□□□□ 0.82
RPS4Y2Q8TD47 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.16■□□□□ 0.82
RPS4Y2Q8TD47 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPS4Y2Q8TD47 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPS4Y2Q8TD47 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPS4Y2Q8TD47 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RPS4Y2Q8TD47 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
RPS4Y2Q8TD47 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS4Y2Q8TD47 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4Y2Q8TD47 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4Y2Q8TD47 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RPS4Y2Q8TD47 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4Y2Q8TD47 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.13■□□□□ 0.81
RPS4Y2Q8TD47 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4Y2Q8TD47 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RPS4Y2Q8TD47 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS4Y2Q8TD47 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 AC090877.2-201ENST00000558441 1738 ntBASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.12■□□□□ 0.81
RPS4Y2Q8TD47 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 AC233723.2-201ENST00000623798 2106 ntBASIC20.11■□□□□ 0.81
RPS4Y2Q8TD47 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4Y2Q8TD47 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RPS4Y2Q8TD47 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4Y2Q8TD47 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPS4Y2Q8TD47 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.1■□□□□ 0.81
RPS4Y2Q8TD47 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
RPS4Y2Q8TD47 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y2Q8TD47 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 RNF126P1-201ENST00000567452 1320 ntBASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.08■□□□□ 0.81
RPS4Y2Q8TD47 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPS4Y2Q8TD47 CLDN5-201ENST00000403084 2357 ntBASIC20.08■□□□□ 0.8
RPS4Y2Q8TD47 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.08■□□□□ 0.8
RPS4Y2Q8TD47 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPS4Y2Q8TD47 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms