Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNIH3Q8TBE1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNIH3Q8TBE1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNIH3Q8TBE1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CNIH3Q8TBE1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.99■□□□□ 0.95
CNIH3Q8TBE1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNIH3Q8TBE1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.98■□□□□ 0.95
CNIH3Q8TBE1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.98■□□□□ 0.95
CNIH3Q8TBE1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNIH3Q8TBE1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.98■□□□□ 0.95
CNIH3Q8TBE1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.98■□□□□ 0.95
CNIH3Q8TBE1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.98■□□□□ 0.95
CNIH3Q8TBE1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNIH3Q8TBE1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CNIH3Q8TBE1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNIH3Q8TBE1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.98■□□□□ 0.95
CNIH3Q8TBE1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNIH3Q8TBE1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNIH3Q8TBE1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNIH3Q8TBE1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNIH3Q8TBE1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNIH3Q8TBE1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNIH3Q8TBE1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.97■□□□□ 0.95
CNIH3Q8TBE1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CNIH3Q8TBE1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNIH3Q8TBE1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
CNIH3Q8TBE1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNIH3Q8TBE1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
CNIH3Q8TBE1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNIH3Q8TBE1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.97■□□□□ 0.95
CNIH3Q8TBE1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNIH3Q8TBE1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CNIH3Q8TBE1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
CNIH3Q8TBE1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CNIH3Q8TBE1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CNIH3Q8TBE1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNIH3Q8TBE1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNIH3Q8TBE1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNIH3Q8TBE1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
CNIH3Q8TBE1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNIH3Q8TBE1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.95■□□□□ 0.94
CNIH3Q8TBE1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.95■□□□□ 0.94
CNIH3Q8TBE1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNIH3Q8TBE1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNIH3Q8TBE1 AC007375.3-201ENST00000600936 2314 ntBASIC20.94■□□□□ 0.94
CNIH3Q8TBE1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNIH3Q8TBE1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNIH3Q8TBE1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNIH3Q8TBE1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 AC092068.2-201ENST00000590491 1708 ntBASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CNIH3Q8TBE1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNIH3Q8TBE1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNIH3Q8TBE1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNIH3Q8TBE1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNIH3Q8TBE1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.92■□□□□ 0.94
CNIH3Q8TBE1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNIH3Q8TBE1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.92■□□□□ 0.94
CNIH3Q8TBE1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNIH3Q8TBE1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.92■□□□□ 0.94
CNIH3Q8TBE1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
CNIH3Q8TBE1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.92■□□□□ 0.94
CNIH3Q8TBE1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNIH3Q8TBE1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.92■□□□□ 0.94
CNIH3Q8TBE1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNIH3Q8TBE1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms