Protein–RNA interactions for Protein: Q8NHV9

RHOXF1, Rhox homeobox family member 1, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1Q8NHV9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RHOXF1Q8NHV9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.9■□□□□ 0.94
RHOXF1Q8NHV9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RHOXF1Q8NHV9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RHOXF1Q8NHV9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RHOXF1Q8NHV9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RHOXF1Q8NHV9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RHOXF1Q8NHV9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
RHOXF1Q8NHV9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RHOXF1Q8NHV9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.89■□□□□ 0.93
RHOXF1Q8NHV9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.89■□□□□ 0.93
RHOXF1Q8NHV9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.89■□□□□ 0.93
RHOXF1Q8NHV9 AC092068.2-201ENST00000590491 1708 ntBASIC20.89■□□□□ 0.93
RHOXF1Q8NHV9 C1orf229-201ENST00000623686 2258 ntBASIC20.89■□□□□ 0.93
RHOXF1Q8NHV9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RHOXF1Q8NHV9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RHOXF1Q8NHV9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RHOXF1Q8NHV9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RHOXF1Q8NHV9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RHOXF1Q8NHV9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RHOXF1Q8NHV9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RHOXF1Q8NHV9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.88■□□□□ 0.93
RHOXF1Q8NHV9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.88■□□□□ 0.93
RHOXF1Q8NHV9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.88■□□□□ 0.93
RHOXF1Q8NHV9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.88■□□□□ 0.93
RHOXF1Q8NHV9 SMPD5-203ENST00000639008 1464 ntBASIC20.88■□□□□ 0.93
RHOXF1Q8NHV9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RHOXF1Q8NHV9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHOXF1Q8NHV9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RHOXF1Q8NHV9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RHOXF1Q8NHV9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RHOXF1Q8NHV9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RHOXF1Q8NHV9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHOXF1Q8NHV9 CR559946.2-201ENST00000623684 991 ntBASIC20.87■□□□□ 0.93
RHOXF1Q8NHV9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHOXF1Q8NHV9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RHOXF1Q8NHV9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.87■□□□□ 0.93
RHOXF1Q8NHV9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHOXF1Q8NHV9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHOXF1Q8NHV9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RHOXF1Q8NHV9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RHOXF1Q8NHV9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHOXF1Q8NHV9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RHOXF1Q8NHV9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RHOXF1Q8NHV9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RHOXF1Q8NHV9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
RHOXF1Q8NHV9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.86■□□□□ 0.93
RHOXF1Q8NHV9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.86■□□□□ 0.93
RHOXF1Q8NHV9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.86■□□□□ 0.93
RHOXF1Q8NHV9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.86■□□□□ 0.93
RHOXF1Q8NHV9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RHOXF1Q8NHV9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RHOXF1Q8NHV9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RHOXF1Q8NHV9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RHOXF1Q8NHV9 LINC00526-201ENST00000581067 1875 ntBASIC20.86■□□□□ 0.93
RHOXF1Q8NHV9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RHOXF1Q8NHV9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RHOXF1Q8NHV9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RHOXF1Q8NHV9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.85■□□□□ 0.93
RHOXF1Q8NHV9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RHOXF1Q8NHV9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RHOXF1Q8NHV9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RHOXF1Q8NHV9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RHOXF1Q8NHV9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RHOXF1Q8NHV9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RHOXF1Q8NHV9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RHOXF1Q8NHV9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RHOXF1Q8NHV9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RHOXF1Q8NHV9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
RHOXF1Q8NHV9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.84■□□□□ 0.93
RHOXF1Q8NHV9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.84■□□□□ 0.93
RHOXF1Q8NHV9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RHOXF1Q8NHV9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RHOXF1Q8NHV9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RHOXF1Q8NHV9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RHOXF1Q8NHV9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RHOXF1Q8NHV9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.84■□□□□ 0.93
RHOXF1Q8NHV9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
RHOXF1Q8NHV9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RHOXF1Q8NHV9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
RHOXF1Q8NHV9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.83■□□□□ 0.93
RHOXF1Q8NHV9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RHOXF1Q8NHV9 ZNRF2P2-203ENST00000454624 420 ntBASIC20.83■□□□□ 0.93
RHOXF1Q8NHV9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RHOXF1Q8NHV9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RHOXF1Q8NHV9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RHOXF1Q8NHV9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.82■□□□□ 0.92
RHOXF1Q8NHV9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RHOXF1Q8NHV9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RHOXF1Q8NHV9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RHOXF1Q8NHV9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RHOXF1Q8NHV9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RHOXF1Q8NHV9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RHOXF1Q8NHV9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.82■□□□□ 0.92
RHOXF1Q8NHV9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.81■□□□□ 0.92
RHOXF1Q8NHV9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHOXF1Q8NHV9 GUSBP5-202ENST00000510805 1989 ntBASIC20.81■□□□□ 0.92
RHOXF1Q8NHV9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.81■□□□□ 0.92
RHOXF1Q8NHV9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.81■□□□□ 0.92
RHOXF1Q8NHV9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms