Protein–RNA interactions for Protein: Q8NHU3

SGMS2, Phosphatidylcholine:ceramide cholinephosphotransferase 2, humanhuman

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2Q8NHU3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGMS2Q8NHU3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGMS2Q8NHU3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.81■□□□□ 0.6
SGMS2Q8NHU3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.81■□□□□ 0.6
SGMS2Q8NHU3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.81■□□□□ 0.6
SGMS2Q8NHU3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGMS2Q8NHU3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGMS2Q8NHU3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGMS2Q8NHU3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SGMS2Q8NHU3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SGMS2Q8NHU3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGMS2Q8NHU3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.8■□□□□ 0.6
SGMS2Q8NHU3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.8■□□□□ 0.6
SGMS2Q8NHU3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.8■□□□□ 0.6
SGMS2Q8NHU3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SGMS2Q8NHU3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.8■□□□□ 0.6
SGMS2Q8NHU3 AC092028.1-203ENST00000608262 953 ntBASIC18.8■□□□□ 0.6
SGMS2Q8NHU3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGMS2Q8NHU3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SGMS2Q8NHU3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.8■□□□□ 0.6
SGMS2Q8NHU3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGMS2Q8NHU3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SGMS2Q8NHU3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 AL356740.2-201ENST00000601559 647 ntBASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SGMS2Q8NHU3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SGMS2Q8NHU3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
SGMS2Q8NHU3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.78■□□□□ 0.6
SGMS2Q8NHU3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.78■□□□□ 0.6
SGMS2Q8NHU3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SGMS2Q8NHU3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SGMS2Q8NHU3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SGMS2Q8NHU3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SGMS2Q8NHU3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SGMS2Q8NHU3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SGMS2Q8NHU3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SGMS2Q8NHU3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SGMS2Q8NHU3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SGMS2Q8NHU3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SGMS2Q8NHU3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SGMS2Q8NHU3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SGMS2Q8NHU3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SGMS2Q8NHU3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SGMS2Q8NHU3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.77■□□□□ 0.6
SGMS2Q8NHU3 MIR3621-201ENST00000580529 85 ntBASIC18.77■□□□□ 0.6
SGMS2Q8NHU3 AL117332.1-201ENST00000622628 974 ntBASIC18.77■□□□□ 0.6
SGMS2Q8NHU3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.77■□□□□ 0.6
SGMS2Q8NHU3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SGMS2Q8NHU3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SGMS2Q8NHU3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SGMS2Q8NHU3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGMS2Q8NHU3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGMS2Q8NHU3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGMS2Q8NHU3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.76■□□□□ 0.59
SGMS2Q8NHU3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SGMS2Q8NHU3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SGMS2Q8NHU3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGMS2Q8NHU3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.76■□□□□ 0.59
SGMS2Q8NHU3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SGMS2Q8NHU3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGMS2Q8NHU3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SGMS2Q8NHU3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SGMS2Q8NHU3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SGMS2Q8NHU3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SGMS2Q8NHU3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SGMS2Q8NHU3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SGMS2Q8NHU3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SGMS2Q8NHU3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SGMS2Q8NHU3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SGMS2Q8NHU3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SGMS2Q8NHU3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SGMS2Q8NHU3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.74■□□□□ 0.59
SGMS2Q8NHU3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.74■□□□□ 0.59
SGMS2Q8NHU3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SGMS2Q8NHU3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SGMS2Q8NHU3 ZNRF2P3-201ENST00000424200 374 ntBASIC18.74■□□□□ 0.59
SGMS2Q8NHU3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SGMS2Q8NHU3 MIR6724-1-201ENST00000616420 92 ntBASIC18.74■□□□□ 0.59
SGMS2Q8NHU3 MIR6724-2-201ENST00000616483 92 ntBASIC18.74■□□□□ 0.59
SGMS2Q8NHU3 MIR6724-4-201ENST00000617390 92 ntBASIC18.74■□□□□ 0.59
SGMS2Q8NHU3 MIR6724-3-201ENST00000622482 92 ntBASIC18.74■□□□□ 0.59
SGMS2Q8NHU3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SGMS2Q8NHU3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SGMS2Q8NHU3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms