Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BBS1Q8NFJ9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BBS1Q8NFJ9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BBS1Q8NFJ9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BBS1Q8NFJ9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BBS1Q8NFJ9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
BBS1Q8NFJ9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BBS1Q8NFJ9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.65■□□□□ 0.9
BBS1Q8NFJ9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.65■□□□□ 0.9
BBS1Q8NFJ9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BBS1Q8NFJ9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BBS1Q8NFJ9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BBS1Q8NFJ9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BBS1Q8NFJ9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BBS1Q8NFJ9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.64■□□□□ 0.9
BBS1Q8NFJ9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BBS1Q8NFJ9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BBS1Q8NFJ9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BBS1Q8NFJ9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BBS1Q8NFJ9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BBS1Q8NFJ9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BBS1Q8NFJ9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BBS1Q8NFJ9 AC133552.2-201ENST00000619106 1032 ntBASIC20.64■□□□□ 0.89
BBS1Q8NFJ9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
BBS1Q8NFJ9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.64■□□□□ 0.89
BBS1Q8NFJ9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BBS1Q8NFJ9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BBS1Q8NFJ9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BBS1Q8NFJ9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
BBS1Q8NFJ9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.64■□□□□ 0.89
BBS1Q8NFJ9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BBS1Q8NFJ9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.63■□□□□ 0.89
BBS1Q8NFJ9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.63■□□□□ 0.89
BBS1Q8NFJ9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BBS1Q8NFJ9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BBS1Q8NFJ9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.63■□□□□ 0.89
BBS1Q8NFJ9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BBS1Q8NFJ9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BBS1Q8NFJ9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
BBS1Q8NFJ9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BBS1Q8NFJ9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BBS1Q8NFJ9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BBS1Q8NFJ9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.62■□□□□ 0.89
BBS1Q8NFJ9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
BBS1Q8NFJ9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
BBS1Q8NFJ9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
BBS1Q8NFJ9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BBS1Q8NFJ9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
BBS1Q8NFJ9 ANOS2P-203ENST00000472227 1816 ntBASIC20.62■□□□□ 0.89
BBS1Q8NFJ9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
BBS1Q8NFJ9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
BBS1Q8NFJ9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.62■□□□□ 0.89
BBS1Q8NFJ9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BBS1Q8NFJ9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BBS1Q8NFJ9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
BBS1Q8NFJ9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.61■□□□□ 0.89
BBS1Q8NFJ9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
BBS1Q8NFJ9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BBS1Q8NFJ9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.61■□□□□ 0.89
BBS1Q8NFJ9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BBS1Q8NFJ9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BBS1Q8NFJ9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BBS1Q8NFJ9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BBS1Q8NFJ9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BBS1Q8NFJ9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BBS1Q8NFJ9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BBS1Q8NFJ9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BBS1Q8NFJ9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
BBS1Q8NFJ9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
BBS1Q8NFJ9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
BBS1Q8NFJ9 MIR4449-201ENST00000578365 66 ntBASIC20.6■□□□□ 0.89
BBS1Q8NFJ9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BBS1Q8NFJ9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BBS1Q8NFJ9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BBS1Q8NFJ9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BBS1Q8NFJ9 AC090877.2-201ENST00000558441 1738 ntBASIC20.59■□□□□ 0.89
BBS1Q8NFJ9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
BBS1Q8NFJ9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BBS1Q8NFJ9 RPS2P7-201ENST00000447334 885 ntBASIC20.59■□□□□ 0.89
BBS1Q8NFJ9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BBS1Q8NFJ9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BBS1Q8NFJ9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
BBS1Q8NFJ9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.59■□□□□ 0.89
BBS1Q8NFJ9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BBS1Q8NFJ9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.58■□□□□ 0.89
BBS1Q8NFJ9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BBS1Q8NFJ9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BBS1Q8NFJ9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BBS1Q8NFJ9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
BBS1Q8NFJ9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BBS1Q8NFJ9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.58■□□□□ 0.89
BBS1Q8NFJ9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.58■□□□□ 0.89
BBS1Q8NFJ9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BBS1Q8NFJ9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BBS1Q8NFJ9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BBS1Q8NFJ9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.57■□□□□ 0.88
BBS1Q8NFJ9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
BBS1Q8NFJ9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
BBS1Q8NFJ9 SPCS2P3-201ENST00000500401 656 ntBASIC20.57■□□□□ 0.88
BBS1Q8NFJ9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms