Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.86■■□□□ 1.25
PHC3Q8NDX5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PHC3Q8NDX5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PHC3Q8NDX5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
PHC3Q8NDX5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PHC3Q8NDX5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PHC3Q8NDX5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PHC3Q8NDX5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PHC3Q8NDX5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PHC3Q8NDX5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PHC3Q8NDX5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PHC3Q8NDX5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PHC3Q8NDX5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PHC3Q8NDX5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PHC3Q8NDX5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.85■■□□□ 1.25
PHC3Q8NDX5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.85■■□□□ 1.25
PHC3Q8NDX5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PHC3Q8NDX5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.85■■□□□ 1.25
PHC3Q8NDX5 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.85■■□□□ 1.25
PHC3Q8NDX5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.85■■□□□ 1.25
PHC3Q8NDX5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
PHC3Q8NDX5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
PHC3Q8NDX5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.84■■□□□ 1.25
PHC3Q8NDX5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PHC3Q8NDX5 AC090877.2-201ENST00000558441 1738 ntBASIC22.84■■□□□ 1.25
PHC3Q8NDX5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PHC3Q8NDX5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PHC3Q8NDX5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
PHC3Q8NDX5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PHC3Q8NDX5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
PHC3Q8NDX5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PHC3Q8NDX5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.83■■□□□ 1.25
PHC3Q8NDX5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.83■■□□□ 1.25
PHC3Q8NDX5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PHC3Q8NDX5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PHC3Q8NDX5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PHC3Q8NDX5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PHC3Q8NDX5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PHC3Q8NDX5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PHC3Q8NDX5 AC009299.2-201ENST00000482477 511 ntBASIC22.82■■□□□ 1.24
PHC3Q8NDX5 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.82■■□□□ 1.24
PHC3Q8NDX5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
PHC3Q8NDX5 AC138932.3-201ENST00000567634 1902 ntBASIC22.82■■□□□ 1.24
PHC3Q8NDX5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PHC3Q8NDX5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PHC3Q8NDX5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PHC3Q8NDX5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
PHC3Q8NDX5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PHC3Q8NDX5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
PHC3Q8NDX5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.8■■□□□ 1.24
PHC3Q8NDX5 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PHC3Q8NDX5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.8■■□□□ 1.24
PHC3Q8NDX5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PHC3Q8NDX5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PHC3Q8NDX5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.8■■□□□ 1.24
PHC3Q8NDX5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PHC3Q8NDX5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PHC3Q8NDX5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.8■■□□□ 1.24
PHC3Q8NDX5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.8■■□□□ 1.24
PHC3Q8NDX5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PHC3Q8NDX5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.8■■□□□ 1.24
PHC3Q8NDX5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PHC3Q8NDX5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
PHC3Q8NDX5 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PHC3Q8NDX5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PHC3Q8NDX5 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PHC3Q8NDX5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.79■■□□□ 1.24
PHC3Q8NDX5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
PHC3Q8NDX5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.79■■□□□ 1.24
PHC3Q8NDX5 AC011551.1-201ENST00000614101 683 ntBASIC22.79■■□□□ 1.24
PHC3Q8NDX5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
PHC3Q8NDX5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.79■■□□□ 1.24
PHC3Q8NDX5 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PHC3Q8NDX5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.79■■□□□ 1.24
PHC3Q8NDX5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
PHC3Q8NDX5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PHC3Q8NDX5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PHC3Q8NDX5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PHC3Q8NDX5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PHC3Q8NDX5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.78■■□□□ 1.24
PHC3Q8NDX5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.78■■□□□ 1.24
PHC3Q8NDX5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PHC3Q8NDX5 MIR4281-201ENST00000580852 62 ntBASIC22.78■■□□□ 1.24
PHC3Q8NDX5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.78■■□□□ 1.24
PHC3Q8NDX5 MIR6089-201ENST00000616698 64 ntBASIC22.78■■□□□ 1.24
PHC3Q8NDX5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.78■■□□□ 1.24
PHC3Q8NDX5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PHC3Q8NDX5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.78■■□□□ 1.24
PHC3Q8NDX5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.78■■□□□ 1.24
PHC3Q8NDX5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
PHC3Q8NDX5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PHC3Q8NDX5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
PHC3Q8NDX5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PHC3Q8NDX5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PHC3Q8NDX5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PHC3Q8NDX5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.77■■□□□ 1.24
PHC3Q8NDX5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PHC3Q8NDX5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
PHC3Q8NDX5 AL035685.1-201ENST00000636663 812 ntBASIC22.77■■□□□ 1.24
PHC3Q8NDX5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms