Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EXD3Q8N9H8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.66■■□□□ 1.06
EXD3Q8N9H8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EXD3Q8N9H8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EXD3Q8N9H8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EXD3Q8N9H8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
EXD3Q8N9H8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.66■■□□□ 1.06
EXD3Q8N9H8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.66■■□□□ 1.06
EXD3Q8N9H8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.66■■□□□ 1.06
EXD3Q8N9H8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EXD3Q8N9H8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EXD3Q8N9H8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
EXD3Q8N9H8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.65■■□□□ 1.06
EXD3Q8N9H8 SNX5-217ENST00000606557 1087 ntBASIC21.65■■□□□ 1.06
EXD3Q8N9H8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.65■■□□□ 1.06
EXD3Q8N9H8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
EXD3Q8N9H8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
EXD3Q8N9H8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
EXD3Q8N9H8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
EXD3Q8N9H8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
EXD3Q8N9H8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EXD3Q8N9H8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EXD3Q8N9H8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
EXD3Q8N9H8 AP001330.3-201ENST00000520123 633 ntBASIC21.64■■□□□ 1.05
EXD3Q8N9H8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
EXD3Q8N9H8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.64■■□□□ 1.05
EXD3Q8N9H8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
EXD3Q8N9H8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
EXD3Q8N9H8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EXD3Q8N9H8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.63■■□□□ 1.05
EXD3Q8N9H8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.63■■□□□ 1.05
EXD3Q8N9H8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
EXD3Q8N9H8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EXD3Q8N9H8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.62■■□□□ 1.05
EXD3Q8N9H8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
EXD3Q8N9H8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EXD3Q8N9H8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
EXD3Q8N9H8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
EXD3Q8N9H8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EXD3Q8N9H8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
EXD3Q8N9H8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
EXD3Q8N9H8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
EXD3Q8N9H8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
EXD3Q8N9H8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
EXD3Q8N9H8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
EXD3Q8N9H8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EXD3Q8N9H8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.61■■□□□ 1.05
EXD3Q8N9H8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
EXD3Q8N9H8 AC096887.2-201ENST00000623443 1957 ntBASIC21.6■■□□□ 1.05
EXD3Q8N9H8 AC091305.1-201ENST00000479476 895 ntBASIC21.6■■□□□ 1.05
EXD3Q8N9H8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.6■■□□□ 1.05
EXD3Q8N9H8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EXD3Q8N9H8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EXD3Q8N9H8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
EXD3Q8N9H8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EXD3Q8N9H8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
EXD3Q8N9H8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
EXD3Q8N9H8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.6■■□□□ 1.05
EXD3Q8N9H8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
EXD3Q8N9H8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.59■■□□□ 1.05
EXD3Q8N9H8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
EXD3Q8N9H8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EXD3Q8N9H8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.59■■□□□ 1.05
EXD3Q8N9H8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
EXD3Q8N9H8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
EXD3Q8N9H8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
EXD3Q8N9H8 AC090192.1-201ENST00000517740 490 ntBASIC21.58■■□□□ 1.05
EXD3Q8N9H8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
EXD3Q8N9H8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
EXD3Q8N9H8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
EXD3Q8N9H8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
EXD3Q8N9H8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EXD3Q8N9H8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
EXD3Q8N9H8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.57■■□□□ 1.04
EXD3Q8N9H8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
EXD3Q8N9H8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EXD3Q8N9H8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
EXD3Q8N9H8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EXD3Q8N9H8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EXD3Q8N9H8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
EXD3Q8N9H8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.56■■□□□ 1.04
EXD3Q8N9H8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
EXD3Q8N9H8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EXD3Q8N9H8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.56■■□□□ 1.04
EXD3Q8N9H8 AC004448.1-201ENST00000458332 883 ntBASIC21.56■■□□□ 1.04
EXD3Q8N9H8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.56■■□□□ 1.04
EXD3Q8N9H8 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.56■■□□□ 1.04
EXD3Q8N9H8 RARRES2P11-201ENST00000635158 484 ntBASIC21.56■■□□□ 1.04
EXD3Q8N9H8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.56■■□□□ 1.04
EXD3Q8N9H8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.56■■□□□ 1.04
EXD3Q8N9H8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
EXD3Q8N9H8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EXD3Q8N9H8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
EXD3Q8N9H8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EXD3Q8N9H8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.55■■□□□ 1.04
EXD3Q8N9H8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
EXD3Q8N9H8 CA15P2-201ENST00000611168 834 ntBASIC21.55■■□□□ 1.04
EXD3Q8N9H8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
EXD3Q8N9H8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
EXD3Q8N9H8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms