Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
CHPFQ8IZ52 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CHPFQ8IZ52 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CHPFQ8IZ52 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.43■■□□□ 1.34
CHPFQ8IZ52 AC106739.1-201ENST00000617035 715 ntBASIC23.43■■□□□ 1.34
CHPFQ8IZ52 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHPFQ8IZ52 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHPFQ8IZ52 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CHPFQ8IZ52 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CHPFQ8IZ52 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CHPFQ8IZ52 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CHPFQ8IZ52 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CHPFQ8IZ52 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CHPFQ8IZ52 UNC93B3-201ENST00000308076 687 ntBASIC23.42■■□□□ 1.34
CHPFQ8IZ52 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
CHPFQ8IZ52 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.42■■□□□ 1.34
CHPFQ8IZ52 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CHPFQ8IZ52 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.42■■□□□ 1.34
CHPFQ8IZ52 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CHPFQ8IZ52 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CHPFQ8IZ52 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CHPFQ8IZ52 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
CHPFQ8IZ52 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.41■■□□□ 1.34
CHPFQ8IZ52 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CHPFQ8IZ52 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CHPFQ8IZ52 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHPFQ8IZ52 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.41■■□□□ 1.34
CHPFQ8IZ52 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.41■■□□□ 1.34
CHPFQ8IZ52 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CHPFQ8IZ52 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.4■■□□□ 1.34
CHPFQ8IZ52 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.4■■□□□ 1.34
CHPFQ8IZ52 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.4■■□□□ 1.34
CHPFQ8IZ52 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.4■■□□□ 1.34
CHPFQ8IZ52 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.4■■□□□ 1.34
CHPFQ8IZ52 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.4■■□□□ 1.34
CHPFQ8IZ52 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHPFQ8IZ52 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.4■■□□□ 1.34
CHPFQ8IZ52 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.4■■□□□ 1.34
CHPFQ8IZ52 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
CHPFQ8IZ52 AC131274.2-201ENST00000580697 1507 ntBASIC23.39■■□□□ 1.34
CHPFQ8IZ52 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHPFQ8IZ52 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CHPFQ8IZ52 AL136162.1-201ENST00000607711 1078 ntBASIC23.39■■□□□ 1.33
CHPFQ8IZ52 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHPFQ8IZ52 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.39■■□□□ 1.33
CHPFQ8IZ52 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHPFQ8IZ52 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHPFQ8IZ52 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
CHPFQ8IZ52 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
CHPFQ8IZ52 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.39■■□□□ 1.33
CHPFQ8IZ52 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.38■■□□□ 1.33
CHPFQ8IZ52 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHPFQ8IZ52 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHPFQ8IZ52 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHPFQ8IZ52 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHPFQ8IZ52 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHPFQ8IZ52 AC145676.1-201ENST00000514988 2004 ntBASIC23.37■■□□□ 1.33
CHPFQ8IZ52 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CHPFQ8IZ52 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.37■■□□□ 1.33
CHPFQ8IZ52 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHPFQ8IZ52 AC142381.2-201ENST00000566120 298 ntBASIC23.37■■□□□ 1.33
CHPFQ8IZ52 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.37■■□□□ 1.33
CHPFQ8IZ52 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.37■■□□□ 1.33
CHPFQ8IZ52 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CHPFQ8IZ52 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHPFQ8IZ52 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CHPFQ8IZ52 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CHPFQ8IZ52 AC135279.3-201ENST00000610945 1311 ntBASIC23.36■■□□□ 1.33
CHPFQ8IZ52 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.36■■□□□ 1.33
CHPFQ8IZ52 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.36■■□□□ 1.33
CHPFQ8IZ52 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHPFQ8IZ52 MIR6089-201ENST00000616698 64 ntBASIC23.36■■□□□ 1.33
CHPFQ8IZ52 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CHPFQ8IZ52 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.35■■□□□ 1.33
CHPFQ8IZ52 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHPFQ8IZ52 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
CHPFQ8IZ52 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
CHPFQ8IZ52 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHPFQ8IZ52 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHPFQ8IZ52 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHPFQ8IZ52 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CHPFQ8IZ52 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHPFQ8IZ52 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHPFQ8IZ52 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CHPFQ8IZ52 AL022069.1-201ENST00000568025 1636 ntBASIC23.33■■□□□ 1.33
CHPFQ8IZ52 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHPFQ8IZ52 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHPFQ8IZ52 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHPFQ8IZ52 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHPFQ8IZ52 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.33■■□□□ 1.33
CHPFQ8IZ52 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.33■■□□□ 1.33
CHPFQ8IZ52 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.33■■□□□ 1.32
CHPFQ8IZ52 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.32■■□□□ 1.32
CHPFQ8IZ52 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.32■■□□□ 1.32
CHPFQ8IZ52 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHPFQ8IZ52 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHPFQ8IZ52 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHPFQ8IZ52 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CHPFQ8IZ52 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHPFQ8IZ52 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms