Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
SLX4Q8IY92 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.52■■■□□ 2.16
SLX4Q8IY92 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SLX4Q8IY92 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SLX4Q8IY92 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC28.52■■■□□ 2.16
SLX4Q8IY92 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SLX4Q8IY92 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.52■■■□□ 2.16
SLX4Q8IY92 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.52■■■□□ 2.16
SLX4Q8IY92 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.16
SLX4Q8IY92 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC28.51■■■□□ 2.15
SLX4Q8IY92 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
SLX4Q8IY92 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC28.5■■■□□ 2.15
SLX4Q8IY92 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SLX4Q8IY92 AC006455.2-201ENST00000429931 906 ntBASIC28.5■■■□□ 2.15
SLX4Q8IY92 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.5■■■□□ 2.15
SLX4Q8IY92 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
SLX4Q8IY92 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SLX4Q8IY92 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SLX4Q8IY92 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC28.5■■■□□ 2.15
SLX4Q8IY92 SP2-202ENST00000613139 908 ntTSL 5 BASIC28.5■■■□□ 2.15
SLX4Q8IY92 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
SLX4Q8IY92 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SLX4Q8IY92 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SLX4Q8IY92 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SLX4Q8IY92 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC28.49■■■□□ 2.15
SLX4Q8IY92 AC009102.2-201ENST00000606772 1639 ntBASIC28.49■■■□□ 2.15
SLX4Q8IY92 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
SLX4Q8IY92 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC28.49■■■□□ 2.15
SLX4Q8IY92 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SLX4Q8IY92 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC28.48■■■□□ 2.15
SLX4Q8IY92 AL031602.1-201ENST00000633169 911 ntBASIC28.48■■■□□ 2.15
SLX4Q8IY92 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SLX4Q8IY92 KRT18P5-201ENST00000436075 1291 ntBASIC28.48■■■□□ 2.15
SLX4Q8IY92 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
SLX4Q8IY92 AC136469.2-201ENST00000623944 1028 ntBASIC28.48■■■□□ 2.15
SLX4Q8IY92 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
SLX4Q8IY92 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.47■■■□□ 2.15
SLX4Q8IY92 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SLX4Q8IY92 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC28.47■■■□□ 2.15
SLX4Q8IY92 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
SLX4Q8IY92 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC28.47■■■□□ 2.15
SLX4Q8IY92 HES6-206ENST00000409574 738 ntTSL 2 BASIC28.46■■■□□ 2.15
SLX4Q8IY92 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC28.46■■■□□ 2.15
SLX4Q8IY92 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC28.46■■■□□ 2.15
SLX4Q8IY92 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SLX4Q8IY92 SNX3-202ENST00000349379 890 ntTSL 2 BASIC28.46■■■□□ 2.15
SLX4Q8IY92 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC28.46■■■□□ 2.15
SLX4Q8IY92 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC28.46■■■□□ 2.15
SLX4Q8IY92 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
SLX4Q8IY92 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC28.45■■■□□ 2.15
SLX4Q8IY92 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
SLX4Q8IY92 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC28.45■■■□□ 2.15
SLX4Q8IY92 AC010501.1-201ENST00000606270 1962 ntBASIC28.45■■■□□ 2.14
SLX4Q8IY92 ASB1-202ENST00000409297 878 ntTSL 5 BASIC28.45■■■□□ 2.14
SLX4Q8IY92 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SLX4Q8IY92 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SLX4Q8IY92 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC28.44■■■□□ 2.14
SLX4Q8IY92 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC28.44■■■□□ 2.14
SLX4Q8IY92 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SLX4Q8IY92 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SLX4Q8IY92 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
SLX4Q8IY92 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC28.43■■■□□ 2.14
SLX4Q8IY92 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SLX4Q8IY92 AC092437.1-201ENST00000624794 1048 ntBASIC28.43■■■□□ 2.14
SLX4Q8IY92 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.43■■■□□ 2.14
SLX4Q8IY92 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
SLX4Q8IY92 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SLX4Q8IY92 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC28.43■■■□□ 2.14
SLX4Q8IY92 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC28.43■■■□□ 2.14
SLX4Q8IY92 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SLX4Q8IY92 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SLX4Q8IY92 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SLX4Q8IY92 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC28.42■■■□□ 2.14
SLX4Q8IY92 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SLX4Q8IY92 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC28.42■■■□□ 2.14
SLX4Q8IY92 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.42■■■□□ 2.14
SLX4Q8IY92 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SLX4Q8IY92 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
SLX4Q8IY92 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
SLX4Q8IY92 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC28.41■■■□□ 2.14
SLX4Q8IY92 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC28.41■■■□□ 2.14
SLX4Q8IY92 AC022517.1-201ENST00000592429 346 ntBASIC28.41■■■□□ 2.14
SLX4Q8IY92 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC28.41■■■□□ 2.14
SLX4Q8IY92 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
SLX4Q8IY92 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SLX4Q8IY92 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SLX4Q8IY92 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SLX4Q8IY92 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
SLX4Q8IY92 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SLX4Q8IY92 AC233992.3-201ENST00000607491 485 ntBASIC28.4■■■□□ 2.14
SLX4Q8IY92 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC28.39■■■□□ 2.14
SLX4Q8IY92 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.39■■■□□ 2.14
SLX4Q8IY92 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.39■■■□□ 2.14
SLX4Q8IY92 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
SLX4Q8IY92 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.13
SLX4Q8IY92 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
SLX4Q8IY92 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.13
SLX4Q8IY92 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.13
SLX4Q8IY92 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.39■■■□□ 2.13
SLX4Q8IY92 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC28.39■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms