Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FAM90A1Q86YD7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FAM90A1Q86YD7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
FAM90A1Q86YD7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.35■□□□□ 0.69
FAM90A1Q86YD7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FAM90A1Q86YD7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
FAM90A1Q86YD7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
FAM90A1Q86YD7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FAM90A1Q86YD7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
FAM90A1Q86YD7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.34■□□□□ 0.69
FAM90A1Q86YD7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
FAM90A1Q86YD7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.34■□□□□ 0.69
FAM90A1Q86YD7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.34■□□□□ 0.69
FAM90A1Q86YD7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FAM90A1Q86YD7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FAM90A1Q86YD7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
FAM90A1Q86YD7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.33■□□□□ 0.69
FAM90A1Q86YD7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FAM90A1Q86YD7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
FAM90A1Q86YD7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.33■□□□□ 0.68
FAM90A1Q86YD7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.33■□□□□ 0.68
FAM90A1Q86YD7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.33■□□□□ 0.68
FAM90A1Q86YD7 MIR4787-201ENST00000607364 84 ntBASIC19.33■□□□□ 0.68
FAM90A1Q86YD7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FAM90A1Q86YD7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FAM90A1Q86YD7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
FAM90A1Q86YD7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FAM90A1Q86YD7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FAM90A1Q86YD7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
FAM90A1Q86YD7 AC131274.2-201ENST00000580697 1507 ntBASIC19.32■□□□□ 0.68
FAM90A1Q86YD7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FAM90A1Q86YD7 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.32■□□□□ 0.68
FAM90A1Q86YD7 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.32■□□□□ 0.68
FAM90A1Q86YD7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.32■□□□□ 0.68
FAM90A1Q86YD7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FAM90A1Q86YD7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.32■□□□□ 0.68
FAM90A1Q86YD7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.32■□□□□ 0.68
FAM90A1Q86YD7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.31■□□□□ 0.68
FAM90A1Q86YD7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FAM90A1Q86YD7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM90A1Q86YD7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM90A1Q86YD7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FAM90A1Q86YD7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.31■□□□□ 0.68
FAM90A1Q86YD7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.31■□□□□ 0.68
FAM90A1Q86YD7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FAM90A1Q86YD7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM90A1Q86YD7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
FAM90A1Q86YD7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM90A1Q86YD7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM90A1Q86YD7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM90A1Q86YD7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM90A1Q86YD7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
FAM90A1Q86YD7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM90A1Q86YD7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM90A1Q86YD7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FAM90A1Q86YD7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM90A1Q86YD7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
FAM90A1Q86YD7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM90A1Q86YD7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.29■□□□□ 0.68
FAM90A1Q86YD7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM90A1Q86YD7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM90A1Q86YD7 AC004812.2-201ENST00000611079 2094 ntBASIC19.29■□□□□ 0.68
FAM90A1Q86YD7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.29■□□□□ 0.68
FAM90A1Q86YD7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM90A1Q86YD7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.28■□□□□ 0.68
FAM90A1Q86YD7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM90A1Q86YD7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.28■□□□□ 0.68
FAM90A1Q86YD7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
FAM90A1Q86YD7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.28■□□□□ 0.68
FAM90A1Q86YD7 AC092028.1-203ENST00000608262 953 ntBASIC19.28■□□□□ 0.68
FAM90A1Q86YD7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FAM90A1Q86YD7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FAM90A1Q86YD7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.28■□□□□ 0.68
FAM90A1Q86YD7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.28■□□□□ 0.68
FAM90A1Q86YD7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.28■□□□□ 0.68
FAM90A1Q86YD7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.28■□□□□ 0.68
FAM90A1Q86YD7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.27■□□□□ 0.68
FAM90A1Q86YD7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FAM90A1Q86YD7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FAM90A1Q86YD7 GUSBP5-201ENST00000418136 578 ntBASIC19.27■□□□□ 0.68
FAM90A1Q86YD7 SNX5-217ENST00000606557 1087 ntBASIC19.27■□□□□ 0.68
FAM90A1Q86YD7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FAM90A1Q86YD7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FAM90A1Q86YD7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FAM90A1Q86YD7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
FAM90A1Q86YD7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FAM90A1Q86YD7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FAM90A1Q86YD7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.26■□□□□ 0.67
FAM90A1Q86YD7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FAM90A1Q86YD7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
FAM90A1Q86YD7 AC004448.1-201ENST00000458332 883 ntBASIC19.26■□□□□ 0.67
FAM90A1Q86YD7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.26■□□□□ 0.67
FAM90A1Q86YD7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.26■□□□□ 0.67
FAM90A1Q86YD7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.26■□□□□ 0.67
FAM90A1Q86YD7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FAM90A1Q86YD7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FAM90A1Q86YD7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.26■□□□□ 0.67
FAM90A1Q86YD7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FAM90A1Q86YD7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FAM90A1Q86YD7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms