Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LAPTM4BQ86VI4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LAPTM4BQ86VI4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.83■■□□□ 1.09
LAPTM4BQ86VI4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
LAPTM4BQ86VI4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
LAPTM4BQ86VI4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LAPTM4BQ86VI4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.83■■□□□ 1.09
LAPTM4BQ86VI4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LAPTM4BQ86VI4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LAPTM4BQ86VI4 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.82■■□□□ 1.08
LAPTM4BQ86VI4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.82■■□□□ 1.08
LAPTM4BQ86VI4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LAPTM4BQ86VI4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
LAPTM4BQ86VI4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LAPTM4BQ86VI4 AC142381.3-201ENST00000568208 1670 ntBASIC21.82■■□□□ 1.08
LAPTM4BQ86VI4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LAPTM4BQ86VI4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.81■■□□□ 1.08
LAPTM4BQ86VI4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LAPTM4BQ86VI4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
LAPTM4BQ86VI4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LAPTM4BQ86VI4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.81■■□□□ 1.08
LAPTM4BQ86VI4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.81■■□□□ 1.08
LAPTM4BQ86VI4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.81■■□□□ 1.08
LAPTM4BQ86VI4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LAPTM4BQ86VI4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
LAPTM4BQ86VI4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LAPTM4BQ86VI4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LAPTM4BQ86VI4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LAPTM4BQ86VI4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LAPTM4BQ86VI4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LAPTM4BQ86VI4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.8■■□□□ 1.08
LAPTM4BQ86VI4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.8■■□□□ 1.08
LAPTM4BQ86VI4 MTDHP2-201ENST00000601468 714 ntBASIC21.8■■□□□ 1.08
LAPTM4BQ86VI4 MIR6089-201ENST00000616698 64 ntBASIC21.8■■□□□ 1.08
LAPTM4BQ86VI4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
LAPTM4BQ86VI4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LAPTM4BQ86VI4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LAPTM4BQ86VI4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LAPTM4BQ86VI4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LAPTM4BQ86VI4 SNX5-217ENST00000606557 1087 ntBASIC21.79■■□□□ 1.08
LAPTM4BQ86VI4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.79■■□□□ 1.08
LAPTM4BQ86VI4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.79■■□□□ 1.08
LAPTM4BQ86VI4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LAPTM4BQ86VI4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LAPTM4BQ86VI4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LAPTM4BQ86VI4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LAPTM4BQ86VI4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
LAPTM4BQ86VI4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LAPTM4BQ86VI4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LAPTM4BQ86VI4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LAPTM4BQ86VI4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LAPTM4BQ86VI4 AC022211.4-201ENST00000625094 2161 ntBASIC21.78■■□□□ 1.08
LAPTM4BQ86VI4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LAPTM4BQ86VI4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LAPTM4BQ86VI4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LAPTM4BQ86VI4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LAPTM4BQ86VI4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.77■■□□□ 1.08
LAPTM4BQ86VI4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LAPTM4BQ86VI4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LAPTM4BQ86VI4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LAPTM4BQ86VI4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LAPTM4BQ86VI4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.77■■□□□ 1.08
LAPTM4BQ86VI4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.77■■□□□ 1.08
LAPTM4BQ86VI4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.77■■□□□ 1.08
LAPTM4BQ86VI4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LAPTM4BQ86VI4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.77■■□□□ 1.08
LAPTM4BQ86VI4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
LAPTM4BQ86VI4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.07
LAPTM4BQ86VI4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LAPTM4BQ86VI4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LAPTM4BQ86VI4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LAPTM4BQ86VI4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LAPTM4BQ86VI4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LAPTM4BQ86VI4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LAPTM4BQ86VI4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LAPTM4BQ86VI4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.75■■□□□ 1.07
LAPTM4BQ86VI4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.75■■□□□ 1.07
LAPTM4BQ86VI4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.75■■□□□ 1.07
LAPTM4BQ86VI4 MIR6724-1-201ENST00000616420 92 ntBASIC21.75■■□□□ 1.07
LAPTM4BQ86VI4 MIR6724-2-201ENST00000616483 92 ntBASIC21.75■■□□□ 1.07
LAPTM4BQ86VI4 MIR6724-4-201ENST00000617390 92 ntBASIC21.75■■□□□ 1.07
LAPTM4BQ86VI4 MIR6724-3-201ENST00000622482 92 ntBASIC21.75■■□□□ 1.07
LAPTM4BQ86VI4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LAPTM4BQ86VI4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.75■■□□□ 1.07
LAPTM4BQ86VI4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LAPTM4BQ86VI4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAPTM4BQ86VI4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAPTM4BQ86VI4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LAPTM4BQ86VI4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.74■■□□□ 1.07
LAPTM4BQ86VI4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
LAPTM4BQ86VI4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.74■■□□□ 1.07
LAPTM4BQ86VI4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.74■■□□□ 1.07
LAPTM4BQ86VI4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.74■■□□□ 1.07
LAPTM4BQ86VI4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
LAPTM4BQ86VI4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LAPTM4BQ86VI4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LAPTM4BQ86VI4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LAPTM4BQ86VI4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LAPTM4BQ86VI4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LAPTM4BQ86VI4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms