Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.68■■□□□ 1.06
LPCAT4Q643R3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LPCAT4Q643R3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LPCAT4Q643R3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LPCAT4Q643R3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LPCAT4Q643R3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LPCAT4Q643R3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
LPCAT4Q643R3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.67■■□□□ 1.06
LPCAT4Q643R3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LPCAT4Q643R3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LPCAT4Q643R3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LPCAT4Q643R3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LPCAT4Q643R3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.66■■□□□ 1.06
LPCAT4Q643R3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LPCAT4Q643R3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LPCAT4Q643R3 MIR219A2-201ENST00000608502 1504 ntBASIC21.66■■□□□ 1.06
LPCAT4Q643R3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
LPCAT4Q643R3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LPCAT4Q643R3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LPCAT4Q643R3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LPCAT4Q643R3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
LPCAT4Q643R3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LPCAT4Q643R3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
LPCAT4Q643R3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LPCAT4Q643R3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LPCAT4Q643R3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LPCAT4Q643R3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.66■■□□□ 1.06
LPCAT4Q643R3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LPCAT4Q643R3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LPCAT4Q643R3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.65■■□□□ 1.06
LPCAT4Q643R3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LPCAT4Q643R3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LPCAT4Q643R3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LPCAT4Q643R3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LPCAT4Q643R3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LPCAT4Q643R3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LPCAT4Q643R3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
LPCAT4Q643R3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LPCAT4Q643R3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
LPCAT4Q643R3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LPCAT4Q643R3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
LPCAT4Q643R3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
LPCAT4Q643R3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LPCAT4Q643R3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.63■■□□□ 1.05
LPCAT4Q643R3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.63■■□□□ 1.05
LPCAT4Q643R3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
LPCAT4Q643R3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
LPCAT4Q643R3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.63■■□□□ 1.05
LPCAT4Q643R3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
LPCAT4Q643R3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.63■■□□□ 1.05
LPCAT4Q643R3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.63■■□□□ 1.05
LPCAT4Q643R3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.63■■□□□ 1.05
LPCAT4Q643R3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LPCAT4Q643R3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
LPCAT4Q643R3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.63■■□□□ 1.05
LPCAT4Q643R3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
LPCAT4Q643R3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LPCAT4Q643R3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
LPCAT4Q643R3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LPCAT4Q643R3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
LPCAT4Q643R3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LPCAT4Q643R3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LPCAT4Q643R3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
LPCAT4Q643R3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LPCAT4Q643R3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LPCAT4Q643R3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LPCAT4Q643R3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.62■■□□□ 1.05
LPCAT4Q643R3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LPCAT4Q643R3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LPCAT4Q643R3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
LPCAT4Q643R3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LPCAT4Q643R3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
LPCAT4Q643R3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.61■■□□□ 1.05
LPCAT4Q643R3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LPCAT4Q643R3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LPCAT4Q643R3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LPCAT4Q643R3 AC092068.2-201ENST00000590491 1708 ntBASIC21.6■■□□□ 1.05
LPCAT4Q643R3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LPCAT4Q643R3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.6■■□□□ 1.05
LPCAT4Q643R3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LPCAT4Q643R3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LPCAT4Q643R3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LPCAT4Q643R3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.6■■□□□ 1.05
LPCAT4Q643R3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LPCAT4Q643R3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
LPCAT4Q643R3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
LPCAT4Q643R3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LPCAT4Q643R3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LPCAT4Q643R3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LPCAT4Q643R3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
LPCAT4Q643R3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LPCAT4Q643R3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
LPCAT4Q643R3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
LPCAT4Q643R3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
LPCAT4Q643R3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
LPCAT4Q643R3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.58■■□□□ 1.05
LPCAT4Q643R3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
LPCAT4Q643R3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
LPCAT4Q643R3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.58■■□□□ 1.05
LPCAT4Q643R3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms