Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 AC009102.2-201ENST00000606772 1639 ntBASIC25.53■■□□□ 1.68
TRIM60Q495X7 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.53■■□□□ 1.68
TRIM60Q495X7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM60Q495X7 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.53■■□□□ 1.68
TRIM60Q495X7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM60Q495X7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
TRIM60Q495X7 AL137784.2-201ENST00000607332 1000 ntBASIC25.53■■□□□ 1.68
TRIM60Q495X7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM60Q495X7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.52■■□□□ 1.68
TRIM60Q495X7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.52■■□□□ 1.68
TRIM60Q495X7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM60Q495X7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.52■■□□□ 1.68
TRIM60Q495X7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM60Q495X7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
TRIM60Q495X7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRIM60Q495X7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
TRIM60Q495X7 KRT18P5-201ENST00000436075 1291 ntBASIC25.51■■□□□ 1.67
TRIM60Q495X7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRIM60Q495X7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRIM60Q495X7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.51■■□□□ 1.67
TRIM60Q495X7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRIM60Q495X7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRIM60Q495X7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.51■■□□□ 1.67
TRIM60Q495X7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
TRIM60Q495X7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
TRIM60Q495X7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TRIM60Q495X7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.5■■□□□ 1.67
TRIM60Q495X7 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.5■■□□□ 1.67
TRIM60Q495X7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TRIM60Q495X7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.5■■□□□ 1.67
TRIM60Q495X7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.5■■□□□ 1.67
TRIM60Q495X7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
TRIM60Q495X7 AC233992.3-201ENST00000607491 485 ntBASIC25.5■■□□□ 1.67
TRIM60Q495X7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
TRIM60Q495X7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TRIM60Q495X7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.49■■□□□ 1.67
TRIM60Q495X7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.49■■□□□ 1.67
TRIM60Q495X7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TRIM60Q495X7 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.49■■□□□ 1.67
TRIM60Q495X7 AL031602.1-201ENST00000633169 911 ntBASIC25.49■■□□□ 1.67
TRIM60Q495X7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
TRIM60Q495X7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TRIM60Q495X7 AC092437.1-201ENST00000624794 1048 ntBASIC25.48■■□□□ 1.67
TRIM60Q495X7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.48■■□□□ 1.67
TRIM60Q495X7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TRIM60Q495X7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.48■■□□□ 1.67
TRIM60Q495X7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
TRIM60Q495X7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
TRIM60Q495X7 AC131274.2-201ENST00000580697 1507 ntBASIC25.47■■□□□ 1.67
TRIM60Q495X7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TRIM60Q495X7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.47■■□□□ 1.67
TRIM60Q495X7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TRIM60Q495X7 AC006455.2-201ENST00000429931 906 ntBASIC25.47■■□□□ 1.67
TRIM60Q495X7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC25.47■■□□□ 1.67
TRIM60Q495X7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
TRIM60Q495X7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
TRIM60Q495X7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TRIM60Q495X7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TRIM60Q495X7 BX842568.3-201ENST00000418104 571 ntBASIC25.46■■□□□ 1.67
TRIM60Q495X7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TRIM60Q495X7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TRIM60Q495X7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TRIM60Q495X7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
TRIM60Q495X7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
TRIM60Q495X7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.45■■□□□ 1.67
TRIM60Q495X7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.45■■□□□ 1.67
TRIM60Q495X7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
TRIM60Q495X7 ERN1-208ENST00000606895 2068 ntBASIC25.45■■□□□ 1.66
TRIM60Q495X7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.45■■□□□ 1.66
TRIM60Q495X7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.45■■□□□ 1.66
TRIM60Q495X7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM60Q495X7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.45■■□□□ 1.66
TRIM60Q495X7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM60Q495X7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.45■■□□□ 1.66
TRIM60Q495X7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.45■■□□□ 1.66
TRIM60Q495X7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM60Q495X7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM60Q495X7 C17orf82-201ENST00000623772 1530 ntBASIC25.44■■□□□ 1.66
TRIM60Q495X7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TRIM60Q495X7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TRIM60Q495X7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.44■■□□□ 1.66
TRIM60Q495X7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.44■■□□□ 1.66
TRIM60Q495X7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.44■■□□□ 1.66
TRIM60Q495X7 AC241377.3-202ENST00000626088 1088 ntBASIC25.44■■□□□ 1.66
TRIM60Q495X7 AC241585.3-202ENST00000628937 1088 ntBASIC25.44■■□□□ 1.66
TRIM60Q495X7 AC245100.8-202ENST00000629247 1058 ntBASIC25.44■■□□□ 1.66
TRIM60Q495X7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
TRIM60Q495X7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRIM60Q495X7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC25.43■■□□□ 1.66
TRIM60Q495X7 YBX1P1-201ENST00000445822 960 ntBASIC25.43■■□□□ 1.66
TRIM60Q495X7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.43■■□□□ 1.66
TRIM60Q495X7 SLC47A1P1-202ENST00000449666 945 ntBASIC25.43■■□□□ 1.66
TRIM60Q495X7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.43■■□□□ 1.66
TRIM60Q495X7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TRIM60Q495X7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRIM60Q495X7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRIM60Q495X7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
TRIM60Q495X7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRIM60Q495X7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRIM60Q495X7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms