Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCL20P78556 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.13■□□□□ 0.49
CCL20P78556 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCL20P78556 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCL20P78556 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCL20P78556 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCL20P78556 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CCL20P78556 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCL20P78556 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCL20P78556 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCL20P78556 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCL20P78556 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCL20P78556 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCL20P78556 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.12■□□□□ 0.49
CCL20P78556 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCL20P78556 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCL20P78556 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCL20P78556 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCL20P78556 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.11■□□□□ 0.49
CCL20P78556 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.11■□□□□ 0.49
CCL20P78556 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.11■□□□□ 0.49
CCL20P78556 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCL20P78556 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCL20P78556 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCL20P78556 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CCL20P78556 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCL20P78556 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCL20P78556 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCL20P78556 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCL20P78556 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCL20P78556 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.1■□□□□ 0.49
CCL20P78556 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCL20P78556 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.1■□□□□ 0.49
CCL20P78556 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.1■□□□□ 0.49
CCL20P78556 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCL20P78556 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL20P78556 AL359258.2-201ENST00000564063 1566 ntBASIC18.1■□□□□ 0.49
CCL20P78556 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL20P78556 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCL20P78556 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.1■□□□□ 0.49
CCL20P78556 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL20P78556 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CCL20P78556 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCL20P78556 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL20P78556 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL20P78556 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCL20P78556 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.09■□□□□ 0.49
CCL20P78556 SUZ12P1-203ENST00000578195 985 ntBASIC18.09■□□□□ 0.49
CCL20P78556 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL20P78556 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL20P78556 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL20P78556 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCL20P78556 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.09■□□□□ 0.49
CCL20P78556 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCL20P78556 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCL20P78556 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.08■□□□□ 0.49
CCL20P78556 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCL20P78556 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCL20P78556 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCL20P78556 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCL20P78556 DUX4L28-201ENST00000623687 678 ntBASIC18.08■□□□□ 0.48
CCL20P78556 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCL20P78556 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCL20P78556 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCL20P78556 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCL20P78556 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCL20P78556 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCL20P78556 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCL20P78556 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.07■□□□□ 0.48
CCL20P78556 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCL20P78556 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCL20P78556 AC092068.2-201ENST00000590491 1708 ntBASIC18.07■□□□□ 0.48
CCL20P78556 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CCL20P78556 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCL20P78556 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCL20P78556 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCL20P78556 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCL20P78556 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.07■□□□□ 0.48
CCL20P78556 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCL20P78556 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCL20P78556 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCL20P78556 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CCL20P78556 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCL20P78556 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCL20P78556 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.07■□□□□ 0.48
CCL20P78556 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCL20P78556 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCL20P78556 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CCL20P78556 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CCL20P78556 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCL20P78556 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCL20P78556 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCL20P78556 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.06■□□□□ 0.48
CCL20P78556 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCL20P78556 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCL20P78556 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL20P78556 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL20P78556 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCL20P78556 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.05■□□□□ 0.48
CCL20P78556 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms