Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST1H3AP68431 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
HIST1H3AP68431 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST1H3AP68431 AF131216.4-201ENST00000638924 1588 ntBASIC20.12■□□□□ 0.81
HIST1H3AP68431 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST1H3AP68431 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIST1H3AP68431 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST1H3AP68431 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.11■□□□□ 0.81
HIST1H3AP68431 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST1H3AP68431 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.11■□□□□ 0.81
HIST1H3AP68431 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST1H3AP68431 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST1H3AP68431 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST1H3AP68431 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.11■□□□□ 0.81
HIST1H3AP68431 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST1H3AP68431 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HIST1H3AP68431 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.1■□□□□ 0.81
HIST1H3AP68431 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIST1H3AP68431 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HIST1H3AP68431 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.1■□□□□ 0.81
HIST1H3AP68431 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.1■□□□□ 0.81
HIST1H3AP68431 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIST1H3AP68431 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.1■□□□□ 0.81
HIST1H3AP68431 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HIST1H3AP68431 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.1■□□□□ 0.81
HIST1H3AP68431 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST1H3AP68431 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST1H3AP68431 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.09■□□□□ 0.81
HIST1H3AP68431 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST1H3AP68431 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
HIST1H3AP68431 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST1H3AP68431 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.09■□□□□ 0.81
HIST1H3AP68431 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.09■□□□□ 0.81
HIST1H3AP68431 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.09■□□□□ 0.81
HIST1H3AP68431 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST1H3AP68431 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIST1H3AP68431 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIST1H3AP68431 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HIST1H3AP68431 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.08■□□□□ 0.81
HIST1H3AP68431 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIST1H3AP68431 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.08■□□□□ 0.81
HIST1H3AP68431 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.08■□□□□ 0.81
HIST1H3AP68431 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
HIST1H3AP68431 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
HIST1H3AP68431 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HIST1H3AP68431 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.08■□□□□ 0.8
HIST1H3AP68431 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HIST1H3AP68431 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HIST1H3AP68431 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HIST1H3AP68431 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HIST1H3AP68431 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.07■□□□□ 0.8
HIST1H3AP68431 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HIST1H3AP68431 AC103724.3-201ENST00000564481 992 ntBASIC20.07■□□□□ 0.8
HIST1H3AP68431 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.07■□□□□ 0.8
HIST1H3AP68431 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.07■□□□□ 0.8
HIST1H3AP68431 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.07■□□□□ 0.8
HIST1H3AP68431 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HIST1H3AP68431 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIST1H3AP68431 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIST1H3AP68431 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIST1H3AP68431 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HIST1H3AP68431 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST1H3AP68431 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST1H3AP68431 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIST1H3AP68431 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST1H3AP68431 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.05■□□□□ 0.8
HIST1H3AP68431 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.05■□□□□ 0.8
HIST1H3AP68431 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HIST1H3AP68431 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST1H3AP68431 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
HIST1H3AP68431 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.05■□□□□ 0.8
HIST1H3AP68431 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HIST1H3AP68431 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST1H3AP68431 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.05■□□□□ 0.8
HIST1H3AP68431 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HIST1H3AP68431 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIST1H3AP68431 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HIST1H3AP68431 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
HIST1H3AP68431 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HIST1H3AP68431 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST1H3AP68431 YBX1P4-201ENST00000392794 808 ntBASIC20.04■□□□□ 0.8
HIST1H3AP68431 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HIST1H3AP68431 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HIST1H3AP68431 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
HIST1H3AP68431 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIST1H3AP68431 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST1H3AP68431 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST1H3AP68431 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HIST1H3AP68431 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST1H3AP68431 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.03■□□□□ 0.8
HIST1H3AP68431 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HIST1H3AP68431 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIST1H3AP68431 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HIST1H3AP68431 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
HIST1H3AP68431 KRT8P33-201ENST00000508125 1423 ntBASIC20.02■□□□□ 0.8
HIST1H3AP68431 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.02■□□□□ 0.8
HIST1H3AP68431 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIST1H3AP68431 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HIST1H3AP68431 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.02■□□□□ 0.8
HIST1H3AP68431 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms