Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RPS27AP62979 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS27AP62979 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS27AP62979 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS27AP62979 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPS27AP62979 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPS27AP62979 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPS27AP62979 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.69■□□□□ 0.74
RPS27AP62979 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPS27AP62979 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPS27AP62979 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
RPS27AP62979 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.69■□□□□ 0.74
RPS27AP62979 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.69■□□□□ 0.74
RPS27AP62979 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPS27AP62979 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.69■□□□□ 0.74
RPS27AP62979 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.69■□□□□ 0.74
RPS27AP62979 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPS27AP62979 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
RPS27AP62979 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS27AP62979 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS27AP62979 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RPS27AP62979 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS27AP62979 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS27AP62979 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS27AP62979 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RPS27AP62979 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS27AP62979 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS27AP62979 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.68■□□□□ 0.74
RPS27AP62979 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RPS27AP62979 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS27AP62979 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RPS27AP62979 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS27AP62979 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.67■□□□□ 0.74
RPS27AP62979 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS27AP62979 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS27AP62979 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS27AP62979 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS27AP62979 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RPS27AP62979 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS27AP62979 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS27AP62979 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.66■□□□□ 0.74
RPS27AP62979 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPS27AP62979 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS27AP62979 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPS27AP62979 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.66■□□□□ 0.74
RPS27AP62979 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPS27AP62979 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS27AP62979 AL117328.2-201ENST00000624617 1940 ntBASIC19.66■□□□□ 0.74
RPS27AP62979 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.66■□□□□ 0.74
RPS27AP62979 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS27AP62979 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS27AP62979 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS27AP62979 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS27AP62979 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS27AP62979 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS27AP62979 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPS27AP62979 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPS27AP62979 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS27AP62979 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS27AP62979 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.65■□□□□ 0.74
RPS27AP62979 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.65■□□□□ 0.74
RPS27AP62979 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPS27AP62979 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS27AP62979 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RPS27AP62979 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
RPS27AP62979 GPX1-201ENST00000419349 1106 ntBASIC19.64■□□□□ 0.73
RPS27AP62979 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RPS27AP62979 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RPS27AP62979 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPS27AP62979 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPS27AP62979 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPS27AP62979 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS27AP62979 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS27AP62979 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS27AP62979 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RPS27AP62979 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS27AP62979 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPS27AP62979 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPS27AP62979 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS27AP62979 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.63■□□□□ 0.73
RPS27AP62979 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS27AP62979 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.62■□□□□ 0.73
RPS27AP62979 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPS27AP62979 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RPS27AP62979 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPS27AP62979 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.62■□□□□ 0.73
RPS27AP62979 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS27AP62979 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS27AP62979 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
RPS27AP62979 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS27AP62979 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS27AP62979 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS27AP62979 AC009831.1-201ENST00000580420 1582 ntBASIC19.61■□□□□ 0.73
RPS27AP62979 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RPS27AP62979 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS27AP62979 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.61■□□□□ 0.73
RPS27AP62979 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS27AP62979 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS27AP62979 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS27AP62979 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms