Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPS4XP62701 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPS4XP62701 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPS4XP62701 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPS4XP62701 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPS4XP62701 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
RPS4XP62701 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RPS4XP62701 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.78■□□□□ 0.92
RPS4XP62701 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
RPS4XP62701 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RPS4XP62701 AC011551.1-201ENST00000614101 683 ntBASIC20.78■□□□□ 0.92
RPS4XP62701 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4XP62701 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.78■□□□□ 0.92
RPS4XP62701 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4XP62701 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4XP62701 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4XP62701 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.78■□□□□ 0.92
RPS4XP62701 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.78■□□□□ 0.92
RPS4XP62701 AL161729.1-201ENST00000604104 1402 ntBASIC20.78■□□□□ 0.92
RPS4XP62701 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS4XP62701 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4XP62701 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4XP62701 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.77■□□□□ 0.92
RPS4XP62701 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RPS4XP62701 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.77■□□□□ 0.92
RPS4XP62701 AL031848.2-201ENST00000607670 837 ntBASIC20.77■□□□□ 0.92
RPS4XP62701 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS4XP62701 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RPS4XP62701 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.77■□□□□ 0.91
RPS4XP62701 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4XP62701 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4XP62701 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4XP62701 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4XP62701 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4XP62701 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4XP62701 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4XP62701 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS4XP62701 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4XP62701 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4XP62701 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4XP62701 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4XP62701 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.75■□□□□ 0.91
RPS4XP62701 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4XP62701 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4XP62701 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPS4XP62701 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4XP62701 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4XP62701 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4XP62701 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4XP62701 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RPS4XP62701 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.74■□□□□ 0.91
RPS4XP62701 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4XP62701 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RPS4XP62701 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4XP62701 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4XP62701 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RPS4XP62701 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.74■□□□□ 0.91
RPS4XP62701 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.74■□□□□ 0.91
RPS4XP62701 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
RPS4XP62701 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4XP62701 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPS4XP62701 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4XP62701 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.73■□□□□ 0.91
RPS4XP62701 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.73■□□□□ 0.91
RPS4XP62701 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4XP62701 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4XP62701 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4XP62701 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4XP62701 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4XP62701 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.73■□□□□ 0.91
RPS4XP62701 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4XP62701 AC022616.5-201ENST00000518796 181 ntBASIC20.73■□□□□ 0.91
RPS4XP62701 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4XP62701 AC103724.3-201ENST00000564481 992 ntBASIC20.73■□□□□ 0.91
RPS4XP62701 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS4XP62701 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RPS4XP62701 DUSP8P5-201ENST00000422884 1815 ntBASIC20.73■□□□□ 0.91
RPS4XP62701 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
RPS4XP62701 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RPS4XP62701 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.73■□□□□ 0.91
RPS4XP62701 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RPS4XP62701 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.72■□□□□ 0.91
RPS4XP62701 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS4XP62701 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPS4XP62701 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS4XP62701 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS4XP62701 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS4XP62701 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS4XP62701 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RPS4XP62701 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS4XP62701 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RPS4XP62701 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4XP62701 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4XP62701 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
RPS4XP62701 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4XP62701 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.71■□□□□ 0.91
RPS4XP62701 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4XP62701 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS4XP62701 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.7■□□□□ 0.91
RPS4XP62701 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms