Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.2■□□□□ 0.82
LSM6P62312 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSM6P62312 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSM6P62312 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.2■□□□□ 0.82
LSM6P62312 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.2■□□□□ 0.82
LSM6P62312 MIR4281-201ENST00000580852 62 ntBASIC20.2■□□□□ 0.82
LSM6P62312 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSM6P62312 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSM6P62312 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LSM6P62312 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LSM6P62312 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSM6P62312 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LSM6P62312 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LSM6P62312 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSM6P62312 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSM6P62312 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSM6P62312 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LSM6P62312 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LSM6P62312 AC131274.2-201ENST00000580697 1507 ntBASIC20.18■□□□□ 0.82
LSM6P62312 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSM6P62312 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSM6P62312 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
LSM6P62312 YBX1P4-201ENST00000392794 808 ntBASIC20.18■□□□□ 0.82
LSM6P62312 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSM6P62312 AC103834.1-201ENST00000520383 144 ntBASIC20.18■□□□□ 0.82
LSM6P62312 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LSM6P62312 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.18■□□□□ 0.82
LSM6P62312 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSM6P62312 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.18■□□□□ 0.82
LSM6P62312 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LSM6P62312 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LSM6P62312 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSM6P62312 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.18■□□□□ 0.82
LSM6P62312 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM6P62312 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM6P62312 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM6P62312 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM6P62312 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LSM6P62312 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.17■□□□□ 0.82
LSM6P62312 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.17■□□□□ 0.82
LSM6P62312 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LSM6P62312 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LSM6P62312 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LSM6P62312 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.17■□□□□ 0.82
LSM6P62312 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
LSM6P62312 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM6P62312 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM6P62312 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LSM6P62312 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LSM6P62312 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.16■□□□□ 0.82
LSM6P62312 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.16■□□□□ 0.82
LSM6P62312 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LSM6P62312 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LSM6P62312 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LSM6P62312 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LSM6P62312 AF131216.4-201ENST00000638924 1588 ntBASIC20.16■□□□□ 0.82
LSM6P62312 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LSM6P62312 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LSM6P62312 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LSM6P62312 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM6P62312 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM6P62312 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.15■□□□□ 0.82
LSM6P62312 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM6P62312 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.15■□□□□ 0.82
LSM6P62312 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM6P62312 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM6P62312 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.15■□□□□ 0.82
LSM6P62312 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LSM6P62312 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LSM6P62312 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LSM6P62312 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
LSM6P62312 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LSM6P62312 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LSM6P62312 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.13■□□□□ 0.81
LSM6P62312 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSM6P62312 AC103724.3-201ENST00000564481 992 ntBASIC20.13■□□□□ 0.81
LSM6P62312 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.13■□□□□ 0.81
LSM6P62312 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.13■□□□□ 0.81
LSM6P62312 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSM6P62312 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LSM6P62312 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LSM6P62312 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSM6P62312 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.12■□□□□ 0.81
LSM6P62312 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.12■□□□□ 0.81
LSM6P62312 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LSM6P62312 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSM6P62312 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSM6P62312 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LSM6P62312 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.12■□□□□ 0.81
LSM6P62312 KRT8P33-201ENST00000508125 1423 ntBASIC20.11■□□□□ 0.81
LSM6P62312 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
LSM6P62312 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
LSM6P62312 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
LSM6P62312 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.11■□□□□ 0.81
LSM6P62312 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSM6P62312 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.11■□□□□ 0.81
LSM6P62312 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.11■□□□□ 0.81
LSM6P62312 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSM6P62312 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LSM6P62312 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms