Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PER3P56645 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.12■□□□□ 0.97
PER3P56645 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PER3P56645 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.11■□□□□ 0.97
PER3P56645 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PER3P56645 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PER3P56645 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.11■□□□□ 0.97
PER3P56645 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PER3P56645 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PER3P56645 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PER3P56645 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PER3P56645 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PER3P56645 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PER3P56645 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PER3P56645 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PER3P56645 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PER3P56645 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PER3P56645 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PER3P56645 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PER3P56645 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PER3P56645 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PER3P56645 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PER3P56645 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PER3P56645 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PER3P56645 PBX2P1-201ENST00000493219 1291 ntBASIC21.09■□□□□ 0.97
PER3P56645 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.09■□□□□ 0.97
PER3P56645 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PER3P56645 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PER3P56645 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PER3P56645 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PER3P56645 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.08■□□□□ 0.97
PER3P56645 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PER3P56645 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PER3P56645 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PER3P56645 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PER3P56645 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
PER3P56645 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PER3P56645 AC106739.1-201ENST00000617035 715 ntBASIC21.08■□□□□ 0.97
PER3P56645 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.08■□□□□ 0.96
PER3P56645 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PER3P56645 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
PER3P56645 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PER3P56645 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PER3P56645 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PER3P56645 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PER3P56645 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PER3P56645 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PER3P56645 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PER3P56645 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.07■□□□□ 0.96
PER3P56645 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.07■□□□□ 0.96
PER3P56645 AL512631.2-201ENST00000604634 923 ntBASIC21.07■□□□□ 0.96
PER3P56645 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.07■□□□□ 0.96
PER3P56645 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.07■□□□□ 0.96
PER3P56645 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.07■□□□□ 0.96
PER3P56645 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PER3P56645 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.06■□□□□ 0.96
PER3P56645 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.06■□□□□ 0.96
PER3P56645 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PER3P56645 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PER3P56645 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.06■□□□□ 0.96
PER3P56645 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.06■□□□□ 0.96
PER3P56645 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PER3P56645 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PER3P56645 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PER3P56645 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PER3P56645 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PER3P56645 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PER3P56645 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PER3P56645 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PER3P56645 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.05■□□□□ 0.96
PER3P56645 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PER3P56645 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PER3P56645 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PER3P56645 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PER3P56645 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.05■□□□□ 0.96
PER3P56645 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.05■□□□□ 0.96
PER3P56645 AC104564.3-201ENST00000582367 638 ntBASIC21.05■□□□□ 0.96
PER3P56645 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.05■□□□□ 0.96
PER3P56645 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PER3P56645 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PER3P56645 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.05■□□□□ 0.96
PER3P56645 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PER3P56645 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PER3P56645 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PER3P56645 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PER3P56645 MIR5787-201ENST00000611784 55 ntBASIC21.04■□□□□ 0.96
PER3P56645 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.04■□□□□ 0.96
PER3P56645 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.04■□□□□ 0.96
PER3P56645 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PER3P56645 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.03■□□□□ 0.96
PER3P56645 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PER3P56645 ZNRF2P3-201ENST00000424200 374 ntBASIC21.03■□□□□ 0.96
PER3P56645 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.03■□□□□ 0.96
PER3P56645 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PER3P56645 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PER3P56645 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PER3P56645 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PER3P56645 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PER3P56645 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.02■□□□□ 0.96
PER3P56645 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms