Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX2-5P52952 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.69■□□□□ 0.74
NKX2-5P52952 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-5P52952 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-5P52952 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NKX2-5P52952 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.68■□□□□ 0.74
NKX2-5P52952 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-5P52952 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-5P52952 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-5P52952 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-5P52952 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-5P52952 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NKX2-5P52952 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-5P52952 AF106564.1-201ENST00000607058 2553 ntBASIC19.68■□□□□ 0.74
NKX2-5P52952 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-5P52952 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.68■□□□□ 0.74
NKX2-5P52952 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NKX2-5P52952 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-5P52952 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-5P52952 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-5P52952 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.67■□□□□ 0.74
NKX2-5P52952 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-5P52952 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-5P52952 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NKX2-5P52952 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-5P52952 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-5P52952 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-5P52952 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.67■□□□□ 0.74
NKX2-5P52952 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NKX2-5P52952 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-5P52952 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NKX2-5P52952 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NKX2-5P52952 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.66■□□□□ 0.74
NKX2-5P52952 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-5P52952 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.66■□□□□ 0.74
NKX2-5P52952 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
NKX2-5P52952 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-5P52952 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NKX2-5P52952 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-5P52952 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-5P52952 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-5P52952 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-5P52952 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NKX2-5P52952 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-5P52952 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-5P52952 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-5P52952 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-5P52952 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-5P52952 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NKX2-5P52952 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.65■□□□□ 0.74
NKX2-5P52952 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NKX2-5P52952 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-5P52952 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-5P52952 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-5P52952 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.65■□□□□ 0.74
NKX2-5P52952 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.65■□□□□ 0.74
NKX2-5P52952 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
NKX2-5P52952 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.65■□□□□ 0.74
NKX2-5P52952 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
NKX2-5P52952 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NKX2-5P52952 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
NKX2-5P52952 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-5P52952 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-5P52952 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.64■□□□□ 0.73
NKX2-5P52952 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-5P52952 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-5P52952 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NKX2-5P52952 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.64■□□□□ 0.73
NKX2-5P52952 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-5P52952 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-5P52952 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-5P52952 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-5P52952 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NKX2-5P52952 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-5P52952 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-5P52952 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-5P52952 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.63■□□□□ 0.73
NKX2-5P52952 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-5P52952 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.63■□□□□ 0.73
NKX2-5P52952 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-5P52952 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-5P52952 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NKX2-5P52952 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NKX2-5P52952 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-5P52952 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-5P52952 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-5P52952 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.63■□□□□ 0.73
NKX2-5P52952 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-5P52952 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-5P52952 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-5P52952 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-5P52952 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.62■□□□□ 0.73
NKX2-5P52952 AC135983.2-203ENST00000454486 1613 ntBASIC19.62■□□□□ 0.73
NKX2-5P52952 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.62■□□□□ 0.73
NKX2-5P52952 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-5P52952 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-5P52952 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-5P52952 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.62■□□□□ 0.73
NKX2-5P52952 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-5P52952 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms