Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.32■■□□□ 1.16
PDX1P52945 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PDX1P52945 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDX1P52945 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDX1P52945 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDX1P52945 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDX1P52945 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.31■■□□□ 1.16
PDX1P52945 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDX1P52945 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
PDX1P52945 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDX1P52945 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.3■■□□□ 1.16
PDX1P52945 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDX1P52945 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PDX1P52945 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
PDX1P52945 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PDX1P52945 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
PDX1P52945 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDX1P52945 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDX1P52945 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.29■■□□□ 1.16
PDX1P52945 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDX1P52945 AC142381.2-201ENST00000566120 298 ntBASIC22.29■■□□□ 1.16
PDX1P52945 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.29■■□□□ 1.16
PDX1P52945 AL136162.1-201ENST00000607711 1078 ntBASIC22.29■■□□□ 1.16
PDX1P52945 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
PDX1P52945 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PDX1P52945 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.29■■□□□ 1.16
PDX1P52945 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDX1P52945 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.28■■□□□ 1.16
PDX1P52945 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
PDX1P52945 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDX1P52945 SUDS3P1-201ENST00000505831 966 ntBASIC22.28■■□□□ 1.16
PDX1P52945 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDX1P52945 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PDX1P52945 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.27■■□□□ 1.16
PDX1P52945 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PDX1P52945 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.27■■□□□ 1.16
PDX1P52945 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PDX1P52945 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDX1P52945 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDX1P52945 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDX1P52945 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDX1P52945 SRD5A1P1-201ENST00000442297 786 ntBASIC22.27■■□□□ 1.16
PDX1P52945 RARRES2P6-201ENST00000567333 442 ntBASIC22.27■■□□□ 1.16
PDX1P52945 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDX1P52945 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDX1P52945 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.27■■□□□ 1.16
PDX1P52945 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.27■■□□□ 1.16
PDX1P52945 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDX1P52945 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PDX1P52945 AC135279.3-201ENST00000610945 1311 ntBASIC22.27■■□□□ 1.16
PDX1P52945 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDX1P52945 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDX1P52945 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.26■■□□□ 1.15
PDX1P52945 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDX1P52945 AC004448.1-201ENST00000458332 883 ntBASIC22.26■■□□□ 1.15
PDX1P52945 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.26■■□□□ 1.15
PDX1P52945 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.26■■□□□ 1.15
PDX1P52945 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.26■■□□□ 1.15
PDX1P52945 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDX1P52945 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDX1P52945 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
PDX1P52945 AC135731.1-201ENST00000569415 2548 ntBASIC22.25■■□□□ 1.15
PDX1P52945 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDX1P52945 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDX1P52945 AC024257.2-201ENST00000549699 147 ntBASIC22.25■■□□□ 1.15
PDX1P52945 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PDX1P52945 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDX1P52945 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDX1P52945 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.25■■□□□ 1.15
PDX1P52945 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
PDX1P52945 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PDX1P52945 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDX1P52945 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.24■■□□□ 1.15
PDX1P52945 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDX1P52945 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.24■■□□□ 1.15
PDX1P52945 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDX1P52945 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.24■■□□□ 1.15
PDX1P52945 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.24■■□□□ 1.15
PDX1P52945 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDX1P52945 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDX1P52945 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDX1P52945 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDX1P52945 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDX1P52945 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDX1P52945 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDX1P52945 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDX1P52945 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.23■■□□□ 1.15
PDX1P52945 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDX1P52945 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDX1P52945 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.23■■□□□ 1.15
PDX1P52945 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDX1P52945 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDX1P52945 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.22■■□□□ 1.15
PDX1P52945 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PDX1P52945 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PDX1P52945 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.22■■□□□ 1.15
PDX1P52945 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.22■■□□□ 1.15
PDX1P52945 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDX1P52945 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDX1P52945 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms