Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SMSP52788 KRT18P24-201ENST00000344739 1156 ntBASIC21.42■■□□□ 1.02
SMSP52788 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMSP52788 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SMSP52788 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.42■■□□□ 1.02
SMSP52788 KRT16P3-201ENST00000439127 1283 ntBASIC21.42■■□□□ 1.02
SMSP52788 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMSP52788 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.42■■□□□ 1.02
SMSP52788 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.42■■□□□ 1.02
SMSP52788 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMSP52788 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.42■■□□□ 1.02
SMSP52788 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMSP52788 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SMSP52788 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SMSP52788 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.41■■□□□ 1.02
SMSP52788 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMSP52788 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMSP52788 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMSP52788 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.41■■□□□ 1.02
SMSP52788 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.41■■□□□ 1.02
SMSP52788 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMSP52788 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.41■■□□□ 1.02
SMSP52788 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.41■■□□□ 1.02
SMSP52788 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMSP52788 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMSP52788 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SMSP52788 MIR935-201ENST00000401179 91 ntBASIC21.4■■□□□ 1.02
SMSP52788 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
SMSP52788 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SMSP52788 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
SMSP52788 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.02
SMSP52788 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
SMSP52788 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
SMSP52788 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.39■■□□□ 1.01
SMSP52788 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.39■■□□□ 1.01
SMSP52788 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
SMSP52788 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.39■■□□□ 1.01
SMSP52788 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.39■■□□□ 1.01
SMSP52788 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMSP52788 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMSP52788 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.39■■□□□ 1.01
SMSP52788 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMSP52788 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMSP52788 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.38■■□□□ 1.01
SMSP52788 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMSP52788 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SMSP52788 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMSP52788 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.38■■□□□ 1.01
SMSP52788 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.38■■□□□ 1.01
SMSP52788 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.37■■□□□ 1.01
SMSP52788 AC012676.1-201ENST00000574705 1949 ntBASIC21.37■■□□□ 1.01
SMSP52788 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMSP52788 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMSP52788 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.37■■□□□ 1.01
SMSP52788 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.37■■□□□ 1.01
SMSP52788 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.37■■□□□ 1.01
SMSP52788 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMSP52788 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMSP52788 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.36■■□□□ 1.01
SMSP52788 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SMSP52788 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.36■■□□□ 1.01
SMSP52788 UNC93B8-201ENST00000511903 705 ntBASIC21.36■■□□□ 1.01
SMSP52788 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.36■■□□□ 1.01
SMSP52788 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMSP52788 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.36■■□□□ 1.01
SMSP52788 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SMSP52788 AC133561.1-201ENST00000568600 2415 ntBASIC21.36■■□□□ 1.01
SMSP52788 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMSP52788 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMSP52788 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMSP52788 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMSP52788 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SMSP52788 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMSP52788 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.35■■□□□ 1.01
SMSP52788 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMSP52788 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMSP52788 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMSP52788 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.35■■□□□ 1.01
SMSP52788 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SMSP52788 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMSP52788 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMSP52788 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMSP52788 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMSP52788 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMSP52788 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
SMSP52788 AC137630.3-201ENST00000607245 391 ntBASIC21.34■■□□□ 1.01
SMSP52788 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMSP52788 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.34■■□□□ 1.01
SMSP52788 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.34■■□□□ 1.01
SMSP52788 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMSP52788 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMSP52788 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMSP52788 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMSP52788 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.33■■□□□ 1.01
SMSP52788 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.33■■□□□ 1.01
SMSP52788 TSPY9P-201ENST00000440215 945 ntBASIC21.33■■□□□ 1.01
SMSP52788 TSPY11P-201ENST00000442607 1045 ntBASIC21.33■■□□□ 1.01
SMSP52788 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.33■■□□□ 1.01
SMSP52788 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SMSP52788 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms