Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.88■□□□□ 0.61
THBS3P49746 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
THBS3P49746 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.88■□□□□ 0.61
THBS3P49746 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
THBS3P49746 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
THBS3P49746 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.88■□□□□ 0.61
THBS3P49746 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
THBS3P49746 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.88■□□□□ 0.61
THBS3P49746 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
THBS3P49746 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
THBS3P49746 AC004812.2-201ENST00000611079 2094 ntBASIC18.88■□□□□ 0.61
THBS3P49746 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
THBS3P49746 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THBS3P49746 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
THBS3P49746 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
THBS3P49746 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THBS3P49746 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
THBS3P49746 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
THBS3P49746 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
THBS3P49746 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
THBS3P49746 RARRES2P1-201ENST00000474487 481 ntBASIC18.87■□□□□ 0.61
THBS3P49746 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
THBS3P49746 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS3P49746 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
THBS3P49746 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS3P49746 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS3P49746 AC090877.2-201ENST00000558441 1738 ntBASIC18.86■□□□□ 0.61
THBS3P49746 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS3P49746 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS3P49746 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS3P49746 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS3P49746 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS3P49746 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS3P49746 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS3P49746 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
THBS3P49746 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THBS3P49746 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THBS3P49746 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
THBS3P49746 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THBS3P49746 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
THBS3P49746 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THBS3P49746 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
THBS3P49746 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
THBS3P49746 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
THBS3P49746 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
THBS3P49746 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
THBS3P49746 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.85■□□□□ 0.61
THBS3P49746 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.85■□□□□ 0.61
THBS3P49746 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THBS3P49746 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
THBS3P49746 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
THBS3P49746 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS3P49746 AC133561.1-201ENST00000568600 2415 ntBASIC18.84■□□□□ 0.61
THBS3P49746 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS3P49746 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS3P49746 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
THBS3P49746 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
THBS3P49746 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
THBS3P49746 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
THBS3P49746 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
THBS3P49746 BHLHE23-202ENST00000612929 1109 ntBASIC18.84■□□□□ 0.61
THBS3P49746 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
THBS3P49746 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS3P49746 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS3P49746 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
THBS3P49746 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS3P49746 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS3P49746 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
THBS3P49746 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
THBS3P49746 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.83■□□□□ 0.6
THBS3P49746 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.83■□□□□ 0.6
THBS3P49746 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.82■□□□□ 0.6
THBS3P49746 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
THBS3P49746 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
THBS3P49746 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
THBS3P49746 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.82■□□□□ 0.6
THBS3P49746 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.82■□□□□ 0.6
THBS3P49746 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS3P49746 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
THBS3P49746 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS3P49746 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
THBS3P49746 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THBS3P49746 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
THBS3P49746 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
THBS3P49746 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS3P49746 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THBS3P49746 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THBS3P49746 AC074183.2-201ENST00000623112 922 ntBASIC18.81■□□□□ 0.6
THBS3P49746 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS3P49746 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS3P49746 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
THBS3P49746 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS3P49746 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THBS3P49746 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.8■□□□□ 0.6
THBS3P49746 AC139795.1-202ENST00000500444 432 ntBASIC18.8■□□□□ 0.6
THBS3P49746 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.8■□□□□ 0.6
THBS3P49746 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THBS3P49746 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THBS3P49746 ABCB10P4-201ENST00000566803 2184 ntBASIC18.8■□□□□ 0.6
THBS3P49746 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms